Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 CASC19-260ENST00000641828 2001 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 RNA5SP319-201ENST00000362768 119 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 RNU6-670P-201ENST00000364312 104 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 AL391422.1-201ENST00000402155 436 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 MTCO1P45-201ENST00000431457 267 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 UBE2V2P3-201ENST00000433562 437 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 AL157884.3-201ENST00000448273 1184 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 OR2AF1P-201ENST00000454899 889 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 AP000797.2-201ENST00000475768 606 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 RN7SL466P-201ENST00000497546 295 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 HMGB1P44-201ENST00000508597 572 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 SCARNA16.4-201ENST00000516956 187 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 AC124856.1-201ENST00000600819 896 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 AL162574.1-201ENST00000615702 950 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 RNA5SP439-201ENST00000617595 124 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 AL138820.1-201ENST00000617901 5305 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 AL121950.1-201ENST00000624993 2077 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 DBIP1-201ENST00000401435 260 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 SCAND3P1-201ENST00000439854 1060 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 AC105399.1-202ENST00000447303 205 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 RN7SL51P-201ENST00000468230 285 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 AC090638.1-201ENST00000498296 909 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 IMPA1P1-201ENST00000510718 842 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 RNA5SP362-201ENST00000516048 118 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 SCARNA20.4-201ENST00000516969 131 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 AC087888.1-201ENST00000550884 1254 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 OR11H3P-201ENST00000554547 982 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 RN7SL753P-201ENST00000581238 290 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 MIR6768-201ENST00000610734 72 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 AC135068.5-201ENST00000624197 983 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 AC110792.3-201ENST00000595906 1614 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.48□□□□□ -1.53
HLA-DPA1P20036 AC092451.3-201ENST00000625067 1343 ntBASIC5.48□□□□□ -1.53
HLA-DPA1P20036 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DPA1P20036 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DPA1P20036 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DPA1P20036 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DPA1P20036 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
HLA-DPA1P20036 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DPA1P20036 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
HLA-DPA1P20036 AC112198.2-201ENST00000426589 6996 ntBASIC5.47□□□□□ -1.53
HLA-DPA1P20036 AC093849.1-201ENST00000563631 2209 ntBASIC5.47□□□□□ -1.53
HLA-DPA1P20036 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DPA1P20036 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DPA1P20036 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HLA-DPA1P20036 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms