Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 CYCSP29-201ENST00000533731 318 ntBASIC8.42□□□□□ -1.06
TOPBP1Q92547 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC8.42□□□□□ -1.06
TOPBP1Q92547 AL356608.1-201ENST00000610034 820 ntBASIC8.42□□□□□ -1.06
TOPBP1Q92547 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TOPBP1Q92547 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TOPBP1Q92547 OR56B2P-202ENST00000641377 2453 ntBASIC8.42□□□□□ -1.06
TOPBP1Q92547 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TOPBP1Q92547 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
TOPBP1Q92547 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
TOPBP1Q92547 NCLP2-201ENST00000416078 1462 ntBASIC8.41□□□□□ -1.06
TOPBP1Q92547 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TOPBP1Q92547 MAST4-207ENST00000407621 559 ntTSL 2 BASIC8.41□□□□□ -1.06
TOPBP1Q92547 RPL31-204ENST00000409038 817 ntTSL 2 BASIC8.41□□□□□ -1.06
TOPBP1Q92547 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC8.41□□□□□ -1.06
TOPBP1Q92547 AC133555.2-201ENST00000550213 292 ntBASIC8.41□□□□□ -1.06
TOPBP1Q92547 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC8.41□□□□□ -1.06
TOPBP1Q92547 AC023575.1-201ENST00000580510 358 ntBASIC8.41□□□□□ -1.06
TOPBP1Q92547 AC069542.2-201ENST00000624816 216 ntBASIC8.41□□□□□ -1.06
TOPBP1Q92547 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC8.41□□□□□ -1.06
TOPBP1Q92547 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TOPBP1Q92547 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TOPBP1Q92547 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.41□□□□□ -1.06
TOPBP1Q92547 MAPK10-263ENST00000641052 4307 ntBASIC8.41□□□□□ -1.06
TOPBP1Q92547 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
TOPBP1Q92547 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
TOPBP1Q92547 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TOPBP1Q92547 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
TOPBP1Q92547 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC8.4□□□□□ -1.06
TOPBP1Q92547 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TOPBP1Q92547 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TOPBP1Q92547 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TOPBP1Q92547 RNA5SP28-201ENST00000363841 119 ntBASIC8.4□□□□□ -1.06
TOPBP1Q92547 GNG5P2-201ENST00000372054 207 ntBASIC8.4□□□□□ -1.06
TOPBP1Q92547 RN7SKP263-201ENST00000411194 309 ntBASIC8.4□□□□□ -1.06
TOPBP1Q92547 AC114755.2-201ENST00000413520 361 ntBASIC8.4□□□□□ -1.06
TOPBP1Q92547 IGBP1P4-201ENST00000503202 879 ntBASIC8.4□□□□□ -1.06
TOPBP1Q92547 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC8.4□□□□□ -1.06
TOPBP1Q92547 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TOPBP1Q92547 OR8G5-201ENST00000524943 1041 ntBASIC8.4□□□□□ -1.06
TOPBP1Q92547 AC027667.1-201ENST00000545814 304 ntBASIC8.4□□□□□ -1.06
TOPBP1Q92547 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC8.4□□□□□ -1.06
TOPBP1Q92547 AC093765.1-201ENST00000603758 881 ntBASIC8.4□□□□□ -1.06
TOPBP1Q92547 IGKV1OR2-9-201ENST00000603957 287 ntBASIC8.4□□□□□ -1.06
TOPBP1Q92547 IGKV1OR2-11-201ENST00000604120 287 ntBASIC8.4□□□□□ -1.06
TOPBP1Q92547 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TOPBP1Q92547 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC8.4□□□□□ -1.06
TOPBP1Q92547 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
TOPBP1Q92547 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
TOPBP1Q92547 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TOPBP1Q92547 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.4□□□□□ -1.06
TOPBP1Q92547 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC8.4□□□□□ -1.07
TOPBP1Q92547 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
TOPBP1Q92547 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TOPBP1Q92547 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8.39□□□□□ -1.07
TOPBP1Q92547 ASNSP1-204ENST00000641977 1664 ntBASIC8.39□□□□□ -1.07
TOPBP1Q92547 RN7SKP153-201ENST00000365026 316 ntBASIC8.39□□□□□ -1.07
TOPBP1Q92547 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
TOPBP1Q92547 GAPDHP49-201ENST00000421421 961 ntBASIC8.39□□□□□ -1.07
TOPBP1Q92547 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
TOPBP1Q92547 AC005412.2-201ENST00000492004 341 ntBASIC8.39□□□□□ -1.07
TOPBP1Q92547 AC005191.1-201ENST00000603950 358 ntBASIC8.39□□□□□ -1.07
TOPBP1Q92547 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8.39□□□□□ -1.07
TOPBP1Q92547 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TOPBP1Q92547 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
TOPBP1Q92547 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.39□□□□□ -1.07
TOPBP1Q92547 IQCB2P-201ENST00000401788 1633 ntBASIC8.39□□□□□ -1.07
TOPBP1Q92547 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TOPBP1Q92547 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TOPBP1Q92547 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC8.39□□□□□ -1.07
TOPBP1Q92547 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.39□□□□□ -1.07
TOPBP1Q92547 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
TOPBP1Q92547 MIR23A-201ENST00000385245 73 ntBASIC8.39□□□□□ -1.07
TOPBP1Q92547 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC8.39□□□□□ -1.07
TOPBP1Q92547 DNAJA1P3-201ENST00000399417 1194 ntBASIC8.39□□□□□ -1.07
TOPBP1Q92547 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC8.39□□□□□ -1.07
TOPBP1Q92547 NDUFB4P8-201ENST00000435351 367 ntBASIC8.39□□□□□ -1.07
TOPBP1Q92547 AC016831.4-201ENST00000438302 307 ntBASIC8.39□□□□□ -1.07
TOPBP1Q92547 MED28P3-201ENST00000444288 531 ntBASIC8.39□□□□□ -1.07
TOPBP1Q92547 ARL2BPP10-201ENST00000446487 531 ntBASIC8.39□□□□□ -1.07
TOPBP1Q92547 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC8.39□□□□□ -1.07
TOPBP1Q92547 RNA5SP464-201ENST00000516251 108 ntBASIC8.39□□□□□ -1.07
TOPBP1Q92547 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TOPBP1Q92547 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC8.39□□□□□ -1.07
TOPBP1Q92547 AC008782.1-201ENST00000603386 430 ntBASIC8.39□□□□□ -1.07
TOPBP1Q92547 AL121890.3-201ENST00000618494 516 ntBASIC8.39□□□□□ -1.07
TOPBP1Q92547 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
TOPBP1Q92547 AC005225.5-201ENST00000623547 2225 ntBASIC8.38□□□□□ -1.07
TOPBP1Q92547 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC8.38□□□□□ -1.07
TOPBP1Q92547 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TOPBP1Q92547 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
TOPBP1Q92547 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TOPBP1Q92547 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TOPBP1Q92547 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TOPBP1Q92547 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TOPBP1Q92547 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
TOPBP1Q92547 KCNMB3P1-202ENST00000493696 3389 ntBASIC8.38□□□□□ -1.07
TOPBP1Q92547 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TOPBP1Q92547 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TOPBP1Q92547 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC8.38□□□□□ -1.07
TOPBP1Q92547 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms