Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LYPLA1P3-201ENST00000402650 695 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 RNA5SP178-201ENST00000410380 128 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 RN7SKP229-201ENST00000410465 302 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 RPS21P8-201ENST00000413365 247 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AC233982.1-201ENST00000451247 436 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AL606490.1-201ENST00000452266 765 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AC073522.1-201ENST00000483312 377 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 OR8A2P-201ENST00000528631 952 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 RPA2P1-201ENST00000556557 721 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AC008088.1-201ENST00000580993 280 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AC005332.4-201ENST00000592752 579 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AC013444.2-201ENST00000603317 787 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 Z94722.1-201ENST00000604328 474 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AL133507.1-201ENST00000605269 557 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AC004890.3-201ENST00000605566 1095 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AL353726.1-201ENST00000614041 1000 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AL354718.1-201ENST00000619764 589 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AL035661.1-201ENST00000620459 1144 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AP000550.3-201ENST00000637734 379 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AC007996.1-201ENST00000620414 2821 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 NSRP1P1-201ENST00000444067 1693 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 MTCO1P11-201ENST00000429111 1528 ntBASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNPOQ8N3V7 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 RNF6P1-201ENST00000444889 1784 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC104454.1-201ENST00000421341 1401 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 RNA5SP346-201ENST00000363541 121 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 RNU1-46P-201ENST00000384425 164 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 RNA5SP284-201ENST00000384547 118 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AL079342.2-201ENST00000403367 482 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 SNORA11C-201ENST00000408532 129 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC114814.2-201ENST00000419195 485 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 MTND2P18-201ENST00000419962 1030 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 OR5AW1P-201ENST00000426334 1006 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 MTND6P12-201ENST00000428247 522 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AL353662.1-201ENST00000439099 327 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC009263.1-201ENST00000441193 1239 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC007327.1-201ENST00000447461 264 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 HIGD1AP16-201ENST00000450986 258 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 RPL35AP19-201ENST00000469425 329 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms