RNA–Protein interactions for RNA: ENST00000458168.1

LINC00709-201, long intergenic non-protein coding RNA 709, humanhuman

TSL 2 BASIC

Gene LINC00709, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00709-201ENST00000458168 AEBP2Q6ZN18 517 aaPredicted RBP25.54■■□□□ 1.68
LINC00709-201ENST00000458168 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
LINC00709-201ENST00000458168 PHF23Q9BUL5 403 aaPredicted RBP21.8■■□□□ 1.08
LINC00709-201ENST00000458168 SENP3Q9H4L4 574 aaPredicted RBP21.72■■□□□ 1.07
LINC00709-201ENST00000458168 FOXD1Q16676 465 aa20.16■□□□□ 0.82
LINC00709-201ENST00000458168 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
LINC00709-201ENST00000458168 PPP6R1Q9UPN7 881 aa19.28■□□□□ 0.68
LINC00709-201ENST00000458168 ADRA2BP18089 450 aa19.26■□□□□ 0.67
LINC00709-201ENST00000458168 PIAS4Q8N2W9 510 aaPredicted RBP18.99■□□□□ 0.63
LINC00709-201ENST00000458168 MSH5O43196 834 aa18.67■□□□□ 0.58
LINC00709-201ENST00000458168 PPP4R3CPQ6ZMV5 832 aa17.7■□□□□ 0.42
LINC00709-201ENST00000458168 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
LINC00709-201ENST00000458168 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
LINC00709-201ENST00000458168 DMRT2Q9Y5R5 561 aa17.31■□□□□ 0.36
LINC00709-201ENST00000458168 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
LINC00709-201ENST00000458168 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
LINC00709-201ENST00000458168 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
LINC00709-201ENST00000458168 KCNA4P22459 653 aa17.14■□□□□ 0.33
LINC00709-201ENST00000458168 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
LINC00709-201ENST00000458168 RNF216Q9NWF9 866 aaPredicted RBP16.94■□□□□ 0.3
LINC00709-201ENST00000458168 HOXD11P31277 338 aaPredicted RBP16.91■□□□□ 0.3
LINC00709-201ENST00000458168 DCAF8L1A6NGE4 600 aa16.58■□□□□ 0.24
LINC00709-201ENST00000458168 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
LINC00709-201ENST00000458168 SLC4A1APQ9BWU0 796 aaKnown RBP16.31■□□□□ 0.2
LINC00709-201ENST00000458168 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.17
LINC00709-201ENST00000458168 SLC4A2P04920 1241 aa16.03■□□□□ 0.16
LINC00709-201ENST00000458168 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
LINC00709-201ENST00000458168 FOXD4L1Q9NU39 408 aa15.83■□□□□ 0.12
LINC00709-201ENST00000458168 U3KPZ7 1027 aaPredicted RBP15.83■□□□□ 0.12
LINC00709-201ENST00000458168 C1QBPQ07021 282 aaKnown RBP15.78■□□□□ 0.12
LINC00709-201ENST00000458168 ZBTB22O15209 634 aa15.76■□□□□ 0.11
LINC00709-201ENST00000458168 EHMT2Q96KQ7 1210 aa15.69■□□□□ 0.1
LINC00709-201ENST00000458168 MYCNP04198 464 aaPredicted RBP15.68■□□□□ 0.1
LINC00709-201ENST00000458168 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
LINC00709-201ENST00000458168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.62■□□□□ 0.09
LINC00709-201ENST00000458168 HNRNPUL2Q1KMD3 747 aaKnown RBP15.62■□□□□ 0.09
LINC00709-201ENST00000458168 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
LINC00709-201ENST00000458168 SAMD1Q6SPF0 538 aaPredicted RBP15.55■□□□□ 0.08
LINC00709-201ENST00000458168 APLP2Q06481 763 aa15.5■□□□□ 0.07
LINC00709-201ENST00000458168 SPINK5Q9NQ38 1064 aaPredicted RBP15.42■□□□□ 0.06
LINC00709-201ENST00000458168 CAPN15O75808 1086 aa15.39■□□□□ 0.05
LINC00709-201ENST00000458168 ATXN8OSP0DMR3 200 aa15.3■□□□□ 0.04
LINC00709-201ENST00000458168 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
LINC00709-201ENST00000458168 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
LINC00709-201ENST00000458168 ATF5Q9Y2D1 282 aaPredicted RBP15.24■□□□□ 0.03
LINC00709-201ENST00000458168 DSG3P32926 999 aa15.14■□□□□ 0.01
LINC00709-201ENST00000458168 ABCB7O75027 752 aa15.07■□□□□ 0
LINC00709-201ENST00000458168 POLA2Q14181 598 aa14.99□□□□□ -0.01
LINC00709-201ENST00000458168 ZBTB12Q9Y330 459 aaPredicted RBP14.77□□□□□ -0.05
LINC00709-201ENST00000458168 FBLN2P98095 1184 aa14.65□□□□□ -0.06
LINC00709-201ENST00000458168 MKRN4PQ13434 485 aaPredicted RBP14.58□□□□□ -0.08
LINC00709-201ENST00000458168 OSCARQ8IYS5 282 aa14.49□□□□□ -0.09
LINC00709-201ENST00000458168 RBM42Q9BTD8 480 aaKnown RBP14.47□□□□□ -0.09
LINC00709-201ENST00000458168 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
LINC00709-201ENST00000458168 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
LINC00709-201ENST00000458168 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
LINC00709-201ENST00000458168 ZNF692Q9BU19 519 aaPredicted RBP14.26□□□□□ -0.13
LINC00709-201ENST00000458168 AKT1S1Q96B36 256 aa14.25□□□□□ -0.13
LINC00709-201ENST00000458168 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.13
LINC00709-201ENST00000458168 SSUH2Q9Y2M2 353 aa14.21□□□□□ -0.13
LINC00709-201ENST00000458168 FKBP8Q14318 412 aa14.1□□□□□ -0.15
LINC00709-201ENST00000458168 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
LINC00709-201ENST00000458168 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
LINC00709-201ENST00000458168 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
LINC00709-201ENST00000458168 PROM2Q8N271 834 aa13.95□□□□□ -0.18
LINC00709-201ENST00000458168 PITPNM1O00562 1244 aa13.94□□□□□ -0.18
LINC00709-201ENST00000458168 CHRDL2Q6WN34 429 aa13.9□□□□□ -0.18
LINC00709-201ENST00000458168 CLEC11AQ9Y240 323 aa13.89□□□□□ -0.19
LINC00709-201ENST00000458168 STAG3Q9UJ98 1225 aa13.83□□□□□ -0.2
LINC00709-201ENST00000458168 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
LINC00709-201ENST00000458168 FXR2P51116 673 aaKnown RBP eCLIP13.7□□□□□ -0.22
LINC00709-201ENST00000458168 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
LINC00709-201ENST00000458168 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
LINC00709-201ENST00000458168 POTEHQ6S545 545 aa13.6□□□□□ -0.23
LINC00709-201ENST00000458168 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
LINC00709-201ENST00000458168 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
LINC00709-201ENST00000458168 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
LINC00709-201ENST00000458168 MIER1Q8N108 512 aa13.49□□□□□ -0.25
LINC00709-201ENST00000458168 PLEKHG5O94827 1062 aa13.46□□□□□ -0.25
LINC00709-201ENST00000458168 PLCD3Q8N3E9 789 aa13.46□□□□□ -0.25
LINC00709-201ENST00000458168 VASPP50552 380 aaPredicted RBP13.45□□□□□ -0.26
LINC00709-201ENST00000458168 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
LINC00709-201ENST00000458168 MNX1P50219 401 aaPredicted RBP13.37□□□□□ -0.27
LINC00709-201ENST00000458168 ZBTB47Q9UFB7 747 aaPredicted RBP13.34□□□□□ -0.27
LINC00709-201ENST00000458168 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC00709-201ENST00000458168 HAX1O00165 279 aa13.29□□□□□ -0.28
LINC00709-201ENST00000458168 KLHL34Q8N239 644 aa13.26□□□□□ -0.29
LINC00709-201ENST00000458168 IFNLR1Q8IU57 520 aaPredicted RBP13.25□□□□□ -0.29
LINC00709-201ENST00000458168 C19orf67A6NJJ6 358 aa13.24□□□□□ -0.29
LINC00709-201ENST00000458168 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
LINC00709-201ENST00000458168 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
LINC00709-201ENST00000458168 NUBP1P53384 320 aa13.15□□□□□ -0.3
LINC00709-201ENST00000458168 EVX2Q03828 476 aa13.14□□□□□ -0.31
LINC00709-201ENST00000458168 RASEFQ8IZ41 740 aa13.13□□□□□ -0.31
LINC00709-201ENST00000458168 SPOCK2Q92563 424 aa13.13□□□□□ -0.31
LINC00709-201ENST00000458168 ZRANB1Q9UGI0 708 aa13.1□□□□□ -0.31
LINC00709-201ENST00000458168 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
LINC00709-201ENST00000458168 FAM212AQ96EL1 285 aa13.07□□□□□ -0.32
LINC00709-201ENST00000458168 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
LINC00709-201ENST00000458168 SP7Q8TDD2 431 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms