RNA–Protein interactions for RNA: ENST00000424953.1

LINC02238-201, Transcript of long intergenic non-protein coding RNA 2238, humanhuman

TSL 5 BASIC

Gene LINC02238, Length 557 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02238-201ENST00000424953 AEBP2Q6ZN18 517 aaPredicted RBP25.08■■□□□ 1.61
LINC02238-201ENST00000424953 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
LINC02238-201ENST00000424953 SENP3Q9H4L4 574 aaPredicted RBP21.48■■□□□ 1.03
LINC02238-201ENST00000424953 PHF23Q9BUL5 403 aaPredicted RBP21.18■□□□□ 0.98
LINC02238-201ENST00000424953 FOXD1Q16676 465 aa19.96■□□□□ 0.79
LINC02238-201ENST00000424953 PLPPR3Q6T4P5 718 aa19.44■□□□□ 0.7
LINC02238-201ENST00000424953 MSH5O43196 834 aa18.73■□□□□ 0.59
LINC02238-201ENST00000424953 PIAS4Q8N2W9 510 aaPredicted RBP18.69■□□□□ 0.58
LINC02238-201ENST00000424953 PPP6R1Q9UPN7 881 aa18.67■□□□□ 0.58
LINC02238-201ENST00000424953 ADRA2BP18089 450 aa18.63■□□□□ 0.57
LINC02238-201ENST00000424953 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
LINC02238-201ENST00000424953 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
LINC02238-201ENST00000424953 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
LINC02238-201ENST00000424953 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
LINC02238-201ENST00000424953 DMRT2Q9Y5R5 561 aa17■□□□□ 0.31
LINC02238-201ENST00000424953 KCNA4P22459 653 aa16.73■□□□□ 0.27
LINC02238-201ENST00000424953 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
LINC02238-201ENST00000424953 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
LINC02238-201ENST00000424953 NPM3O75607 178 aaKnown RBP16.44■□□□□ 0.22
LINC02238-201ENST00000424953 HOXD11P31277 338 aaPredicted RBP16.39■□□□□ 0.21
LINC02238-201ENST00000424953 DCAF8L1A6NGE4 600 aa16.35■□□□□ 0.21
LINC02238-201ENST00000424953 RNF216Q9NWF9 866 aaPredicted RBP16.33■□□□□ 0.2
LINC02238-201ENST00000424953 CACNB1Q02641 598 aaPredicted RBP16.06■□□□□ 0.16
LINC02238-201ENST00000424953 RNF39Q9H2S5 420 aa15.94■□□□□ 0.14
LINC02238-201ENST00000424953 DNAJC5BQ9UF47 199 aa15.92■□□□□ 0.14
LINC02238-201ENST00000424953 SLC4A1APQ9BWU0 796 aaKnown RBP15.91■□□□□ 0.14
LINC02238-201ENST00000424953 C1QBPQ07021 282 aaKnown RBP15.76■□□□□ 0.11
LINC02238-201ENST00000424953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC02238-201ENST00000424953 SLC4A2P04920 1241 aa15.54■□□□□ 0.08
LINC02238-201ENST00000424953 EHMT2Q96KQ7 1210 aa15.46■□□□□ 0.07
LINC02238-201ENST00000424953 ZBTB22O15209 634 aa15.4■□□□□ 0.06
LINC02238-201ENST00000424953 FOXD4L1Q9NU39 408 aa15.38■□□□□ 0.05
LINC02238-201ENST00000424953 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
LINC02238-201ENST00000424953 U3KPZ7 1027 aaPredicted RBP15.28■□□□□ 0.04
LINC02238-201ENST00000424953 MYCNP04198 464 aaPredicted RBP15.18■□□□□ 0.02
LINC02238-201ENST00000424953 CAPN15O75808 1086 aa15.07■□□□□ 0
LINC02238-201ENST00000424953 SPINK5Q9NQ38 1064 aaPredicted RBP15.04■□□□□ -0
LINC02238-201ENST00000424953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.03■□□□□ -0
LINC02238-201ENST00000424953 HNRNPUL2Q1KMD3 747 aaKnown RBP15.03■□□□□ -0
LINC02238-201ENST00000424953 SAMD1Q6SPF0 538 aaPredicted RBP14.98□□□□□ -0.01
LINC02238-201ENST00000424953 APLP2Q06481 763 aa14.97□□□□□ -0.01
LINC02238-201ENST00000424953 DSG3P32926 999 aa14.94□□□□□ -0.02
LINC02238-201ENST00000424953 ATXN8OSP0DMR3 200 aa14.83□□□□□ -0.04
LINC02238-201ENST00000424953 TRHP20396 242 aaPredicted RBP14.83□□□□□ -0.04
LINC02238-201ENST00000424953 ZNF219Q9P2Y4 722 aaPredicted RBP14.82□□□□□ -0.04
LINC02238-201ENST00000424953 ATF5Q9Y2D1 282 aaPredicted RBP14.81□□□□□ -0.04
LINC02238-201ENST00000424953 ABCB7O75027 752 aa14.69□□□□□ -0.06
LINC02238-201ENST00000424953 POLA2Q14181 598 aa14.48□□□□□ -0.09
LINC02238-201ENST00000424953 RBM42Q9BTD8 480 aaKnown RBP14.32□□□□□ -0.12
LINC02238-201ENST00000424953 POTEHQ6S545 545 aa14.27□□□□□ -0.13
LINC02238-201ENST00000424953 ZBTB12Q9Y330 459 aaPredicted RBP14.2□□□□□ -0.14
LINC02238-201ENST00000424953 FBLN2P98095 1184 aa14.15□□□□□ -0.14
LINC02238-201ENST00000424953 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.14
LINC02238-201ENST00000424953 OSCARQ8IYS5 282 aa13.99□□□□□ -0.17
LINC02238-201ENST00000424953 AKT1S1Q96B36 256 aa13.98□□□□□ -0.17
LINC02238-201ENST00000424953 CHRDL2Q6WN34 429 aa13.95□□□□□ -0.18
LINC02238-201ENST00000424953 SPDYE2BA6NHP3 402 aa13.83□□□□□ -0.2
LINC02238-201ENST00000424953 SPDYE6P0CI01 402 aa13.83□□□□□ -0.2
LINC02238-201ENST00000424953 SPDYE2Q495Y8 402 aa13.83□□□□□ -0.2
LINC02238-201ENST00000424953 SPDYE4A6NLX3 237 aa13.82□□□□□ -0.2
LINC02238-201ENST00000424953 FKBP8Q14318 412 aa13.82□□□□□ -0.2
LINC02238-201ENST00000424953 REM2Q8IYK8 340 aaPredicted RBP13.82□□□□□ -0.2
LINC02238-201ENST00000424953 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
LINC02238-201ENST00000424953 SSUH2Q9Y2M2 353 aa13.72□□□□□ -0.21
LINC02238-201ENST00000424953 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
LINC02238-201ENST00000424953 PABPN1Q86U42 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC02238-201ENST00000424953 PIP4P2Q8N4L2 257 aa13.61□□□□□ -0.23
LINC02238-201ENST00000424953 PROM2Q8N271 834 aa13.57□□□□□ -0.24
LINC02238-201ENST00000424953 FXR2P51116 673 aaKnown RBP eCLIP13.54□□□□□ -0.24
LINC02238-201ENST00000424953 SPDYE1Q8NFV5 336 aaPredicted RBP13.5□□□□□ -0.25
LINC02238-201ENST00000424953 CLEC11AQ9Y240 323 aa13.46□□□□□ -0.25
LINC02238-201ENST00000424953 HAX1O00165 279 aa13.4□□□□□ -0.26
LINC02238-201ENST00000424953 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
LINC02238-201ENST00000424953 STAG3Q9UJ98 1225 aa13.35□□□□□ -0.27
LINC02238-201ENST00000424953 PRKAR2AP13861 404 aaKnown RBP13.33□□□□□ -0.28
LINC02238-201ENST00000424953 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
LINC02238-201ENST00000424953 PRR29P0C7W0 189 aa13.26□□□□□ -0.29
LINC02238-201ENST00000424953 CHADLQ6NUI6 762 aa13.16□□□□□ -0.3
LINC02238-201ENST00000424953 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
LINC02238-201ENST00000424953 EVX2Q03828 476 aa13.15□□□□□ -0.3
LINC02238-201ENST00000424953 C19orf67A6NJJ6 358 aa13.11□□□□□ -0.31
LINC02238-201ENST00000424953 MIER1Q8N108 512 aa13.11□□□□□ -0.31
LINC02238-201ENST00000424953 PLCD3Q8N3E9 789 aa13.09□□□□□ -0.31
LINC02238-201ENST00000424953 CREBZFQ9NS37 354 aa13.09□□□□□ -0.31
LINC02238-201ENST00000424953 PLEKHG5O94827 1062 aa13.02□□□□□ -0.33
LINC02238-201ENST00000424953 FARP1Q9Y4F1 1045 aaPredicted RBP12.99□□□□□ -0.33
LINC02238-201ENST00000424953 IFNLR1Q8IU57 520 aaPredicted RBP12.97□□□□□ -0.33
LINC02238-201ENST00000424953 MNX1P50219 401 aaPredicted RBP12.95□□□□□ -0.34
LINC02238-201ENST00000424953 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
LINC02238-201ENST00000424953 GABBR2O75899 941 aa12.91□□□□□ -0.34
LINC02238-201ENST00000424953 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
LINC02238-201ENST00000424953 ZBTB47Q9UFB7 747 aaPredicted RBP12.91□□□□□ -0.34
LINC02238-201ENST00000424953 NPM1P06748 294 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC02238-201ENST00000424953 SPOCK2Q92563 424 aa12.81□□□□□ -0.36
LINC02238-201ENST00000424953 CLCN6P51797 869 aa12.79□□□□□ -0.36
LINC02238-201ENST00000424953 NUBP1P53384 320 aa12.77□□□□□ -0.37
LINC02238-201ENST00000424953 RASEFQ8IZ41 740 aa12.74□□□□□ -0.37
LINC02238-201ENST00000424953 ZRANB1Q9UGI0 708 aa12.74□□□□□ -0.37
LINC02238-201ENST00000424953 ZNF579Q8NAF0 562 aaKnown RBP12.7□□□□□ -0.38
LINC02238-201ENST00000424953 PAK3O75914 559 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms