RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 AEBP2Q6ZN18 517 aaPredicted RBP26.51■■□□□ 1.83
AC003001.1-201ENST00000443247 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
AC003001.1-201ENST00000443247 SENP3Q9H4L4 574 aaPredicted RBP22.54■■□□□ 1.2
AC003001.1-201ENST00000443247 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
AC003001.1-201ENST00000443247 FOXD1Q16676 465 aa21.07■□□□□ 0.96
AC003001.1-201ENST00000443247 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
AC003001.1-201ENST00000443247 MSH5O43196 834 aa19.68■□□□□ 0.74
AC003001.1-201ENST00000443247 PPP6R1Q9UPN7 881 aa19.68■□□□□ 0.74
AC003001.1-201ENST00000443247 PIAS4Q8N2W9 510 aaPredicted RBP19.64■□□□□ 0.73
AC003001.1-201ENST00000443247 ADRA2BP18089 450 aa19.58■□□□□ 0.72
AC003001.1-201ENST00000443247 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
AC003001.1-201ENST00000443247 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
AC003001.1-201ENST00000443247 DMRT2Q9Y5R5 561 aa17.89■□□□□ 0.45
AC003001.1-201ENST00000443247 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
AC003001.1-201ENST00000443247 PPP4R3CPQ6ZMV5 832 aa17.59■□□□□ 0.41
AC003001.1-201ENST00000443247 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
AC003001.1-201ENST00000443247 CNKSR2Q8WXI2 1034 aa17.19■□□□□ 0.34
AC003001.1-201ENST00000443247 DCAF8L1A6NGE4 600 aa17.11■□□□□ 0.33
AC003001.1-201ENST00000443247 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
AC003001.1-201ENST00000443247 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
AC003001.1-201ENST00000443247 KCNA4P22459 653 aa16.93■□□□□ 0.3
AC003001.1-201ENST00000443247 CACNB1Q02641 598 aaPredicted RBP16.92■□□□□ 0.3
AC003001.1-201ENST00000443247 RNF39Q9H2S5 420 aa16.83■□□□□ 0.28
AC003001.1-201ENST00000443247 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
AC003001.1-201ENST00000443247 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
AC003001.1-201ENST00000443247 C1QBPQ07021 282 aaKnown RBP16.54■□□□□ 0.24
AC003001.1-201ENST00000443247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.35■□□□□ 0.21
AC003001.1-201ENST00000443247 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
AC003001.1-201ENST00000443247 U3KPZ7 1027 aaPredicted RBP16.07■□□□□ 0.16
AC003001.1-201ENST00000443247 SLC4A2P04920 1241 aa15.92■□□□□ 0.14
AC003001.1-201ENST00000443247 SPINK5Q9NQ38 1064 aaPredicted RBP15.85■□□□□ 0.13
AC003001.1-201ENST00000443247 CAPN15O75808 1086 aa15.77■□□□□ 0.12
AC003001.1-201ENST00000443247 DSG3P32926 999 aa15.74■□□□□ 0.11
AC003001.1-201ENST00000443247 EHMT2Q96KQ7 1210 aa15.6■□□□□ 0.09
AC003001.1-201ENST00000443247 FOXD4L1Q9NU39 408 aa15.6■□□□□ 0.09
AC003001.1-201ENST00000443247 ZBTB22O15209 634 aa15.57■□□□□ 0.08
AC003001.1-201ENST00000443247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
AC003001.1-201ENST00000443247 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
AC003001.1-201ENST00000443247 MYCNP04198 464 aaPredicted RBP15.53■□□□□ 0.08
AC003001.1-201ENST00000443247 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.08
AC003001.1-201ENST00000443247 APLP2Q06481 763 aa15.51■□□□□ 0.07
AC003001.1-201ENST00000443247 SAMD1Q6SPF0 538 aaPredicted RBP15.47■□□□□ 0.07
AC003001.1-201ENST00000443247 ZNF219Q9P2Y4 722 aaPredicted RBP15.47■□□□□ 0.07
AC003001.1-201ENST00000443247 ABCB7O75027 752 aa15.44■□□□□ 0.06
AC003001.1-201ENST00000443247 CSRNP3Q8WYN3 585 aa15.41■□□□□ 0.06
AC003001.1-201ENST00000443247 POTEHQ6S545 545 aa15.14■□□□□ 0.01
AC003001.1-201ENST00000443247 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
AC003001.1-201ENST00000443247 ATXN8OSP0DMR3 200 aa15.1■□□□□ 0.01
AC003001.1-201ENST00000443247 POLA2Q14181 598 aa15.1■□□□□ 0.01
AC003001.1-201ENST00000443247 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
AC003001.1-201ENST00000443247 ZBTB12Q9Y330 459 aaPredicted RBP14.74□□□□□ -0.05
AC003001.1-201ENST00000443247 CHRDL2Q6WN34 429 aa14.69□□□□□ -0.06
AC003001.1-201ENST00000443247 OSCARQ8IYS5 282 aa14.64□□□□□ -0.07
AC003001.1-201ENST00000443247 AKT1S1Q96B36 256 aa14.63□□□□□ -0.07
AC003001.1-201ENST00000443247 FBLN2P98095 1184 aa14.54□□□□□ -0.08
AC003001.1-201ENST00000443247 REM2Q8IYK8 340 aaPredicted RBP14.51□□□□□ -0.09
AC003001.1-201ENST00000443247 MKRN4PQ13434 485 aaPredicted RBP14.44□□□□□ -0.1
AC003001.1-201ENST00000443247 PITPNM1O00562 1244 aa14.37□□□□□ -0.11
AC003001.1-201ENST00000443247 PIP4P2Q8N4L2 257 aa14.35□□□□□ -0.11
AC003001.1-201ENST00000443247 SPDYE2BA6NHP3 402 aa14.31□□□□□ -0.12
AC003001.1-201ENST00000443247 SPDYE6P0CI01 402 aa14.31□□□□□ -0.12
AC003001.1-201ENST00000443247 SPDYE2Q495Y8 402 aa14.31□□□□□ -0.12
AC003001.1-201ENST00000443247 FXR2P51116 673 aaKnown RBP eCLIP14.25□□□□□ -0.13
AC003001.1-201ENST00000443247 ZNF692Q9BU19 519 aaPredicted RBP14.19□□□□□ -0.14
AC003001.1-201ENST00000443247 SP7Q8TDD2 431 aaPredicted RBP14.16□□□□□ -0.14
AC003001.1-201ENST00000443247 SSUH2Q9Y2M2 353 aa14.16□□□□□ -0.14
AC003001.1-201ENST00000443247 SPDYE1Q8NFV5 336 aaPredicted RBP14.07□□□□□ -0.16
AC003001.1-201ENST00000443247 HAX1O00165 279 aa14.06□□□□□ -0.16
AC003001.1-201ENST00000443247 CLEC11AQ9Y240 323 aa14.05□□□□□ -0.16
AC003001.1-201ENST00000443247 SPDYE4A6NLX3 237 aa14□□□□□ -0.17
AC003001.1-201ENST00000443247 PRKAR2AP13861 404 aaKnown RBP13.98□□□□□ -0.17
AC003001.1-201ENST00000443247 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
AC003001.1-201ENST00000443247 FKBP8Q14318 412 aa13.97□□□□□ -0.17
AC003001.1-201ENST00000443247 EVX2Q03828 476 aa13.96□□□□□ -0.17
AC003001.1-201ENST00000443247 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
AC003001.1-201ENST00000443247 C19orf67A6NJJ6 358 aa13.8□□□□□ -0.2
AC003001.1-201ENST00000443247 PRR29P0C7W0 189 aa13.8□□□□□ -0.2
AC003001.1-201ENST00000443247 PROM2Q8N271 834 aa13.73□□□□□ -0.21
AC003001.1-201ENST00000443247 STAG3Q9UJ98 1225 aa13.72□□□□□ -0.21
AC003001.1-201ENST00000443247 GABBR2O75899 941 aa13.6□□□□□ -0.23
AC003001.1-201ENST00000443247 FARP1Q9Y4F1 1045 aaPredicted RBP13.6□□□□□ -0.23
AC003001.1-201ENST00000443247 CD44P16070 742 aaKnown RBP13.53□□□□□ -0.24
AC003001.1-201ENST00000443247 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
AC003001.1-201ENST00000443247 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
AC003001.1-201ENST00000443247 POTEIP0CG38 1075 aa13.36□□□□□ -0.27
AC003001.1-201ENST00000443247 ZNF579Q8NAF0 562 aaKnown RBP13.33□□□□□ -0.28
AC003001.1-201ENST00000443247 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
AC003001.1-201ENST00000443247 MIER1Q8N108 512 aa13.31□□□□□ -0.28
AC003001.1-201ENST00000443247 PLEKHG5O94827 1062 aa13.3□□□□□ -0.28
AC003001.1-201ENST00000443247 VASPP50552 380 aaPredicted RBP13.3□□□□□ -0.28
AC003001.1-201ENST00000443247 CLCN6P51797 869 aa13.3□□□□□ -0.28
AC003001.1-201ENST00000443247 MNX1P50219 401 aaPredicted RBP13.28□□□□□ -0.28
AC003001.1-201ENST00000443247 LHX8Q68G74 356 aa13.27□□□□□ -0.29
AC003001.1-201ENST00000443247 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
AC003001.1-201ENST00000443247 NPM1P06748 294 aaKnown RBP eCLIP13.26□□□□□ -0.29
AC003001.1-201ENST00000443247 GALR2O43603 387 aaPredicted RBP13.19□□□□□ -0.3
AC003001.1-201ENST00000443247 DCBLD2Q96PD2 775 aa13.18□□□□□ -0.3
AC003001.1-201ENST00000443247 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
AC003001.1-201ENST00000443247 PHF12Q96QT6 1004 aa13.16□□□□□ -0.3
AC003001.1-201ENST00000443247 ZBTB47Q9UFB7 747 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms