Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RPL7L1P1-201ENST00000448259 785 ntBASIC5.4□□□□□ -1.54
CBX1P83916 AL445466.1-201ENST00000448432 357 ntBASIC5.4□□□□□ -1.54
CBX1P83916 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CBX1P83916 RN7SL517P-201ENST00000462240 305 ntBASIC5.4□□□□□ -1.54
CBX1P83916 AC063955.1-201ENST00000462872 685 ntBASIC5.4□□□□□ -1.54
CBX1P83916 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
CBX1P83916 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.4□□□□□ -1.54
CBX1P83916 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.4□□□□□ -1.54
CBX1P83916 CR383658.1-201ENST00000514609 734 ntBASIC5.4□□□□□ -1.54
CBX1P83916 MRPS5P3-201ENST00000515577 166 ntBASIC5.4□□□□□ -1.54
CBX1P83916 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.4□□□□□ -1.54
CBX1P83916 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.4□□□□□ -1.54
CBX1P83916 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.4□□□□□ -1.54
CBX1P83916 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.4□□□□□ -1.54
CBX1P83916 AC025423.2-201ENST00000537570 439 ntBASIC5.4□□□□□ -1.54
CBX1P83916 DYNLL1P4-201ENST00000549314 266 ntBASIC5.4□□□□□ -1.54
CBX1P83916 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.4□□□□□ -1.54
CBX1P83916 RPL21P7-201ENST00000557463 483 ntBASIC5.4□□□□□ -1.54
CBX1P83916 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.4□□□□□ -1.54
CBX1P83916 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.4□□□□□ -1.54
CBX1P83916 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.4□□□□□ -1.54
CBX1P83916 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.4□□□□□ -1.54
CBX1P83916 QTRT1P1-201ENST00000604344 1078 ntBASIC5.4□□□□□ -1.54
CBX1P83916 AC009027.1-201ENST00000604510 479 ntBASIC5.4□□□□□ -1.54
CBX1P83916 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.4□□□□□ -1.54
CBX1P83916 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.4□□□□□ -1.54
CBX1P83916 AP005431.1-201ENST00000618479 319 ntBASIC5.4□□□□□ -1.54
CBX1P83916 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CBX1P83916 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CBX1P83916 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.4□□□□□ -1.55
CBX1P83916 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.39□□□□□ -1.55
CBX1P83916 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CBX1P83916 MTCO1P28-201ENST00000574177 1528 ntBASIC5.39□□□□□ -1.55
CBX1P83916 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CBX1P83916 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CBX1P83916 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.39□□□□□ -1.55
CBX1P83916 RNF19BPY-201ENST00000458209 1550 ntBASIC5.39□□□□□ -1.55
CBX1P83916 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CBX1P83916 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.39□□□□□ -1.55
CBX1P83916 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CBX1P83916 RNU1-65P-201ENST00000363919 148 ntBASIC5.39□□□□□ -1.55
CBX1P83916 RN7SKP153-201ENST00000365026 316 ntBASIC5.39□□□□□ -1.55
CBX1P83916 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.39□□□□□ -1.55
CBX1P83916 MIR589-201ENST00000385238 99 ntBASIC5.39□□□□□ -1.55
CBX1P83916 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CBX1P83916 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CBX1P83916 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.39□□□□□ -1.55
CBX1P83916 RN7SKP29-201ENST00000410957 272 ntBASIC5.39□□□□□ -1.55
CBX1P83916 RPL21P108-201ENST00000413857 481 ntBASIC5.39□□□□□ -1.55
CBX1P83916 Z93019.1-201ENST00000416450 973 ntBASIC5.39□□□□□ -1.55
CBX1P83916 AC234781.4-201ENST00000419384 244 ntBASIC5.39□□□□□ -1.55
CBX1P83916 CKS1BP6-201ENST00000424932 240 ntBASIC5.39□□□□□ -1.55
CBX1P83916 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.39□□□□□ -1.55
CBX1P83916 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.39□□□□□ -1.55
CBX1P83916 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.39□□□□□ -1.55
CBX1P83916 RPS26P2-201ENST00000440331 348 ntBASIC5.39□□□□□ -1.55
CBX1P83916 WDR82P2-201ENST00000444540 928 ntBASIC5.39□□□□□ -1.55
CBX1P83916 AC002553.3-201ENST00000453002 341 ntBASIC5.39□□□□□ -1.55
CBX1P83916 RPL31P11-202ENST00000454082 372 ntBASIC5.39□□□□□ -1.55
CBX1P83916 AC099521.1-201ENST00000482557 334 ntBASIC5.39□□□□□ -1.55
CBX1P83916 AC109464.1-201ENST00000511091 819 ntBASIC5.39□□□□□ -1.55
CBX1P83916 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.39□□□□□ -1.55
CBX1P83916 RNA5SP96-201ENST00000516041 107 ntBASIC5.39□□□□□ -1.55
CBX1P83916 AC084851.2-201ENST00000530377 364 ntBASIC5.39□□□□□ -1.55
CBX1P83916 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.39□□□□□ -1.55
CBX1P83916 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.39□□□□□ -1.55
CBX1P83916 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.39□□□□□ -1.55
CBX1P83916 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.39□□□□□ -1.55
CBX1P83916 RPL26P30-202ENST00000602923 645 ntBASIC5.39□□□□□ -1.55
CBX1P83916 AC022001.1-201ENST00000605193 268 ntBASIC5.39□□□□□ -1.55
CBX1P83916 AC015813.4-201ENST00000610469 179 ntBASIC5.39□□□□□ -1.55
CBX1P83916 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.39□□□□□ -1.55
CBX1P83916 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.39□□□□□ -1.55
CBX1P83916 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.39□□□□□ -1.55
CBX1P83916 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CBX1P83916 AC007603.3-201ENST00000636915 979 ntBASIC5.39□□□□□ -1.55
CBX1P83916 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CBX1P83916 AC112255.1-201ENST00000624070 2493 ntBASIC5.39□□□□□ -1.55
CBX1P83916 AL354854.1-201ENST00000455940 1363 ntBASIC5.39□□□□□ -1.55
CBX1P83916 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CBX1P83916 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
CBX1P83916 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.38□□□□□ -1.55
CBX1P83916 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.38□□□□□ -1.55
CBX1P83916 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.38□□□□□ -1.55
CBX1P83916 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.38□□□□□ -1.55
CBX1P83916 RN7SKP184-201ENST00000362348 333 ntBASIC5.38□□□□□ -1.55
CBX1P83916 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CBX1P83916 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.38□□□□□ -1.55
CBX1P83916 CDY17P-201ENST00000414121 1282 ntBASIC5.38□□□□□ -1.55
CBX1P83916 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.38□□□□□ -1.55
CBX1P83916 CDY8P-201ENST00000428380 1279 ntBASIC5.38□□□□□ -1.55
CBX1P83916 GAPDHP58-201ENST00000438477 1006 ntBASIC5.38□□□□□ -1.55
CBX1P83916 PA2G4P1-201ENST00000442248 1197 ntBASIC5.38□□□□□ -1.55
CBX1P83916 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.38□□□□□ -1.55
CBX1P83916 CDY20P-201ENST00000447528 1279 ntBASIC5.38□□□□□ -1.55
CBX1P83916 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.38□□□□□ -1.55
CBX1P83916 RN7SL790P-201ENST00000474043 298 ntBASIC5.38□□□□□ -1.55
CBX1P83916 RN7SL570P-201ENST00000484405 292 ntBASIC5.38□□□□□ -1.55
CBX1P83916 RPS4XP18-201ENST00000495480 763 ntBASIC5.38□□□□□ -1.55
CBX1P83916 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms