Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SAMMSON-209ENST00000641222 1100 ntBASIC5.47□□□□□ -1.53
SLC1A1P43005 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC1A1P43005 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC1A1P43005 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SLC1A1P43005 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC1A1P43005 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC1A1P43005 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC1A1P43005 AC104260.2-201ENST00000623551 3497 ntBASIC5.46□□□□□ -1.53
SLC1A1P43005 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SLC1A1P43005 AC004817.4-201ENST00000602396 3625 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SLC1A1P43005 AL450345.1-202ENST00000605741 3881 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC1A1P43005 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SLC1A1P43005 RNA5SP90-201ENST00000364801 99 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC1A1P43005 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC1A1P43005 RNA5SP339-201ENST00000390987 122 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 RN7SKP293-201ENST00000411389 296 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 AC104333.2-201ENST00000422630 192 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC1A1P43005 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC1A1P43005 RPL7P6-201ENST00000480903 738 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 RN7SL273P-201ENST00000481561 299 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 RN7SL466P-201ENST00000497546 295 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 RPS26P24-201ENST00000497656 331 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC1A1P43005 AC097173.1-201ENST00000505862 819 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC1A1P43005 AC012400.1-201ENST00000518452 381 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC1A1P43005 RPL10P14-201ENST00000565265 298 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 AP005262.1-201ENST00000582646 997 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC1A1P43005 AP005131.7-201ENST00000610087 611 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC1A1P43005 OR55B1P-203ENST00000641518 2602 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC1A1P43005 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SLC1A1P43005 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC1A1P43005 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC1A1P43005 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC1A1P43005 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC1A1P43005 PROS2P-201ENST00000474651 1951 ntBASIC5.46□□□□□ -1.54
SLC1A1P43005 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC1A1P43005 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC1A1P43005 CASC19-221ENST00000641309 1382 ntBASIC5.45□□□□□ -1.54
SLC1A1P43005 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.45□□□□□ -1.54
SLC1A1P43005 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC1A1P43005 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC1A1P43005 RN7SKP74-201ENST00000362849 309 ntBASIC5.45□□□□□ -1.54
SLC1A1P43005 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC1A1P43005 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC1A1P43005 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SLC1A1P43005 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC1A1P43005 AL133325.1-201ENST00000421090 382 ntBASIC5.45□□□□□ -1.54
SLC1A1P43005 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC1A1P43005 RPS29P10-201ENST00000439197 166 ntBASIC5.45□□□□□ -1.54
SLC1A1P43005 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC1A1P43005 AP000281.1-201ENST00000444036 316 ntBASIC5.45□□□□□ -1.54
SLC1A1P43005 AL161636.2-201ENST00000445179 927 ntBASIC5.45□□□□□ -1.54
SLC1A1P43005 AC090589.1-201ENST00000473109 362 ntBASIC5.45□□□□□ -1.54
SLC1A1P43005 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC1A1P43005 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC1A1P43005 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.45□□□□□ -1.54
SLC1A1P43005 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC1A1P43005 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.45□□□□□ -1.54
SLC1A1P43005 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC1A1P43005 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC1A1P43005 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC1A1P43005 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC1A1P43005 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC1A1P43005 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC1A1P43005 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC1A1P43005 SUGT1P3-202ENST00000604259 383 ntBASIC5.45□□□□□ -1.54
SLC1A1P43005 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.45□□□□□ -1.54
SLC1A1P43005 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.45□□□□□ -1.54
SLC1A1P43005 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC1A1P43005 AC135068.12-201ENST00000637370 931 ntBASIC5.45□□□□□ -1.54
SLC1A1P43005 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC1A1P43005 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC1A1P43005 Z95331.1-201ENST00000623075 23112 ntBASIC5.45□□□□□ -1.54
SLC1A1P43005 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC1A1P43005 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SLC1A1P43005 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SLC1A1P43005 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC1A1P43005 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC1A1P43005 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC1A1P43005 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC1A1P43005 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SLC1A1P43005 AC027279.1-201ENST00000568885 4284 ntBASIC5.44□□□□□ -1.54
SLC1A1P43005 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SLC1A1P43005 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SLC1A1P43005 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SLC1A1P43005 TMSB4XP4-201ENST00000323496 618 ntBASIC5.44□□□□□ -1.54
SLC1A1P43005 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC1A1P43005 U3.3-201ENST00000362986 216 ntBASIC5.44□□□□□ -1.54
SLC1A1P43005 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC1A1P43005 RNU1-149P-201ENST00000390870 161 ntBASIC5.44□□□□□ -1.54
SLC1A1P43005 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms