Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 PNKDP1-201ENST00000435914 430 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 ARAFP2-201ENST00000440565 559 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 RHEBP2-201ENST00000450289 600 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.34□□□□□ -1.71
CXCL3P19876 AC009963.3-201ENST00000458090 486 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CXCL3P19876 AC044810.1-201ENST00000480271 711 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.34□□□□□ -1.71
CXCL3P19876 AC058823.1-201ENST00000485315 474 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 RN7SL612P-201ENST00000497704 295 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CXCL3P19876 RPEP1-201ENST00000504507 658 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.34□□□□□ -1.71
CXCL3P19876 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.34□□□□□ -1.71
CXCL3P19876 SCARNA18.1-201ENST00000516330 83 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 RN7SKP238-201ENST00000516483 249 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 RN7SKP35-201ENST00000517210 151 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 IGKV3D-25-201ENST00000519599 235 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.34□□□□□ -1.71
CXCL3P19876 WBP1LP3-201ENST00000523033 208 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 HMGN2P36-201ENST00000529541 409 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.34□□□□□ -1.71
CXCL3P19876 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.34□□□□□ -1.71
CXCL3P19876 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.34□□□□□ -1.71
CXCL3P19876 AL356801.1-201ENST00000559320 294 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CXCL3P19876 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.34□□□□□ -1.71
CXCL3P19876 RN7SL708P-201ENST00000580952 299 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 AC233280.2-201ENST00000603917 1070 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 AC124916.2-201ENST00000604416 224 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 AL121890.2-201ENST00000617644 465 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC4.34□□□□□ -1.71
CXCL3P19876 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.34□□□□□ -1.71
CXCL3P19876 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.34□□□□□ -1.71
CXCL3P19876 AC093225.1-201ENST00000506867 1408 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 LYARP1-201ENST00000436977 1501 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CXCL3P19876 AC104118.1-201ENST00000607625 1589 ntBASIC4.34□□□□□ -1.71
CXCL3P19876 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
CXCL3P19876 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CXCL3P19876 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CXCL3P19876 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.34□□□□□ -1.72
CXCL3P19876 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CXCL3P19876 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CXCL3P19876 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CXCL3P19876 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL3P19876 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL3P19876 CASC19-221ENST00000641309 1382 ntBASIC4.33□□□□□ -1.72
CXCL3P19876 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL3P19876 AL929601.4-201ENST00000613011 1341 ntBASIC4.33□□□□□ -1.72
CXCL3P19876 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.33□□□□□ -1.72
CXCL3P19876 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CXCL3P19876 RN7SKP104-201ENST00000362605 328 ntBASIC4.33□□□□□ -1.72
CXCL3P19876 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CXCL3P19876 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL3P19876 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.33□□□□□ -1.72
CXCL3P19876 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL3P19876 AL139148.1-201ENST00000427122 680 ntBASIC4.33□□□□□ -1.72
CXCL3P19876 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.33□□□□□ -1.72
CXCL3P19876 AC009238.2-201ENST00000431026 355 ntBASIC4.33□□□□□ -1.72
CXCL3P19876 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.33□□□□□ -1.72
CXCL3P19876 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL3P19876 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL3P19876 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.33□□□□□ -1.72
CXCL3P19876 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.33□□□□□ -1.72
CXCL3P19876 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL3P19876 AC093166.2-201ENST00000455969 1017 ntBASIC4.33□□□□□ -1.72
CXCL3P19876 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.33□□□□□ -1.72
CXCL3P19876 RN7SL189P-201ENST00000468631 289 ntBASIC4.33□□□□□ -1.72
CXCL3P19876 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL3P19876 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.33□□□□□ -1.72
CXCL3P19876 AL049830.4-201ENST00000555149 351 ntBASIC4.33□□□□□ -1.72
CXCL3P19876 AC010547.7-201ENST00000570323 333 ntBASIC4.33□□□□□ -1.72
CXCL3P19876 MIR4502-201ENST00000580432 81 ntBASIC4.33□□□□□ -1.72
CXCL3P19876 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.33□□□□□ -1.72
CXCL3P19876 AC108673.3-201ENST00000609183 335 ntBASIC4.33□□□□□ -1.72
CXCL3P19876 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.33□□□□□ -1.72
CXCL3P19876 MIR6813-201ENST00000621638 56 ntBASIC4.33□□□□□ -1.72
CXCL3P19876 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.33□□□□□ -1.72
CXCL3P19876 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL3P19876 OR51H2P-202ENST00000641424 3046 ntBASIC4.33□□□□□ -1.72
CXCL3P19876 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CXCL3P19876 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL3P19876 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL3P19876 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL3P19876 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CXCL3P19876 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL3P19876 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL3P19876 TTC39DP-201ENST00000416781 1688 ntBASIC4.32□□□□□ -1.72
CXCL3P19876 MTND5P23-201ENST00000430812 1655 ntBASIC4.32□□□□□ -1.72
CXCL3P19876 CR382285.2-201ENST00000624662 1495 ntBASIC4.32□□□□□ -1.72
CXCL3P19876 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL3P19876 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.32□□□□□ -1.72
CXCL3P19876 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL3P19876 SSXP3-201ENST00000442971 1300 ntBASIC4.32□□□□□ -1.72
CXCL3P19876 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.32□□□□□ -1.72
CXCL3P19876 RNFT1P3-201ENST00000340898 1052 ntBASIC4.32□□□□□ -1.72
CXCL3P19876 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CXCL3P19876 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.32□□□□□ -1.72
CXCL3P19876 RNA5SP146-201ENST00000410743 123 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms