Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC079097.1-201ENST00000512187 1399 ntBASIC3.09□□□□□ -1.91
APOBP04114 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC3.09□□□□□ -1.91
APOBP04114 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC3.09□□□□□ -1.91
APOBP04114 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.91
APOBP04114 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
APOBP04114 RN7SKP16-201ENST00000410180 299 ntBASIC3.09□□□□□ -1.91
APOBP04114 RNU2-30P-201ENST00000516209 141 ntBASIC3.09□□□□□ -1.91
APOBP04114 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBP04114 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBP04114 AL445567.2-201ENST00000618935 498 ntBASIC3.09□□□□□ -1.91
APOBP04114 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC3.09□□□□□ -1.91
APOBP04114 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 JPX-212ENST00000639185 9658 ntTSL 5 BASIC3.09□□□□□ -1.91
APOBP04114 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 ERVFRD-3-201ENST00000578561 1617 ntBASIC3.09□□□□□ -1.91
APOBP04114 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC3.09□□□□□ -1.91
APOBP04114 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.09□□□□□ -1.91
APOBP04114 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBP04114 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC3.09□□□□□ -1.91
APOBP04114 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOBP04114 ATP5F1P2-201ENST00000398143 760 ntBASIC3.09□□□□□ -1.92
APOBP04114 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.09□□□□□ -1.92
APOBP04114 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.09□□□□□ -1.92
APOBP04114 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.09□□□□□ -1.92
APOBP04114 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.09□□□□□ -1.92
APOBP04114 AC079064.1-201ENST00000528365 362 ntBASIC3.09□□□□□ -1.92
APOBP04114 HNRNPRP2-201ENST00000528421 743 ntBASIC3.09□□□□□ -1.92
APOBP04114 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC3.09□□□□□ -1.92
APOBP04114 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
APOBP04114 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC3.09□□□□□ -1.92
APOBP04114 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
APOBP04114 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
APOBP04114 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
APOBP04114 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.92
APOBP04114 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
APOBP04114 AL158152.1-201ENST00000602652 1435 ntBASIC3.09□□□□□ -1.92
APOBP04114 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
APOBP04114 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.92
APOBP04114 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
APOBP04114 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.09□□□□□ -1.92
APOBP04114 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.09□□□□□ -1.92
APOBP04114 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
APOBP04114 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
APOBP04114 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
APOBP04114 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.92
APOBP04114 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.92
APOBP04114 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.09□□□□□ -1.92
APOBP04114 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
APOBP04114 MIR372-201ENST00000362225 67 ntBASIC3.09□□□□□ -1.92
APOBP04114 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC3.09□□□□□ -1.92
APOBP04114 RPS27AP12-201ENST00000429552 465 ntBASIC3.09□□□□□ -1.92
APOBP04114 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC3.09□□□□□ -1.92
APOBP04114 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.09□□□□□ -1.92
APOBP04114 MIR3939-201ENST00000582614 106 ntBASIC3.09□□□□□ -1.92
APOBP04114 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.09□□□□□ -1.92
APOBP04114 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.09□□□□□ -1.92
APOBP04114 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
APOBP04114 AC005191.1-201ENST00000603950 358 ntBASIC3.09□□□□□ -1.92
APOBP04114 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.09□□□□□ -1.92
APOBP04114 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
APOBP04114 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC3.08□□□□□ -1.92
APOBP04114 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC3.08□□□□□ -1.92
APOBP04114 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
APOBP04114 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
APOBP04114 ATP5HP3-201ENST00000396994 486 ntBASIC3.08□□□□□ -1.92
APOBP04114 ATP5F1P3-201ENST00000397213 657 ntBASIC3.08□□□□□ -1.92
APOBP04114 OR8G2P-201ENST00000412796 908 ntBASIC3.08□□□□□ -1.92
APOBP04114 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
APOBP04114 SNORA31.9-201ENST00000516429 84 ntBASIC3.08□□□□□ -1.92
APOBP04114 IGKV2-23-201ENST00000518729 323 ntBASIC3.08□□□□□ -1.92
APOBP04114 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.08□□□□□ -1.92
APOBP04114 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.08□□□□□ -1.92
APOBP04114 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 LARS-201ENST00000274562 2213 ntTSL 2 BASIC3.08□□□□□ -1.92
APOBP04114 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC3.08□□□□□ -1.92
APOBP04114 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.08□□□□□ -1.92
APOBP04114 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms