Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN6Q9Y6Q1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.74■□□□□ 0.91
CAPN6Q9Y6Q1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.74■□□□□ 0.91
CAPN6Q9Y6Q1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CAPN6Q9Y6Q1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.74■□□□□ 0.91
CAPN6Q9Y6Q1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.74■□□□□ 0.91
CAPN6Q9Y6Q1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.74■□□□□ 0.91
CAPN6Q9Y6Q1 AC104581.1-202ENST00000635932 2618 ntBASIC20.74■□□□□ 0.91
CAPN6Q9Y6Q1 AC006333.2-201ENST00000607957 2099 ntBASIC20.74■□□□□ 0.91
CAPN6Q9Y6Q1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.74■□□□□ 0.91
CAPN6Q9Y6Q1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CAPN6Q9Y6Q1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN6Q9Y6Q1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 C2orf69P4-201ENST00000565394 541 ntBASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 AC018553.1-201ENST00000616682 1458 ntBASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN6Q9Y6Q1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 KRT17P1-201ENST00000399211 1546 ntBASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN6Q9Y6Q1 AC141586.3-201ENST00000562166 1838 ntBASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN6Q9Y6Q1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms