Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCH2Q9Y6C5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCH2Q9Y6C5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.19■■□□□ 1.14
PTCH2Q9Y6C5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PTCH2Q9Y6C5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC22.19■■□□□ 1.14
PTCH2Q9Y6C5 Z85996.1-201ENST00000494644 937 ntBASIC22.19■■□□□ 1.14
PTCH2Q9Y6C5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.19■■□□□ 1.14
PTCH2Q9Y6C5 MIR3652-201ENST00000579335 131 ntBASIC22.19■■□□□ 1.14
PTCH2Q9Y6C5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
PTCH2Q9Y6C5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCH2Q9Y6C5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PTCH2Q9Y6C5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCH2Q9Y6C5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCH2Q9Y6C5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PTCH2Q9Y6C5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 KRT8P45-201ENST00000414328 1447 ntBASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 AC004870.1-201ENST00000315132 882 ntBASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
PTCH2Q9Y6C5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 LINC01311-201ENST00000565162 1445 ntBASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 KRT17P6-201ENST00000453795 1220 ntBASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 AP003041.3-201ENST00000527151 707 ntBASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 AC111152.3-201ENST00000569699 673 ntBASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 AC004263.2-201ENST00000617183 678 ntBASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 AC244015.2-201ENST00000616358 1861 ntBASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTCH2Q9Y6C5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTCH2Q9Y6C5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.16■■□□□ 1.14
PTCH2Q9Y6C5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.16■■□□□ 1.14
PTCH2Q9Y6C5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
PTCH2Q9Y6C5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTCH2Q9Y6C5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC22.16■■□□□ 1.14
PTCH2Q9Y6C5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.16■■□□□ 1.14
PTCH2Q9Y6C5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.16■■□□□ 1.14
PTCH2Q9Y6C5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PTCH2Q9Y6C5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC22.16■■□□□ 1.14
PTCH2Q9Y6C5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PTCH2Q9Y6C5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PTCH2Q9Y6C5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.16■■□□□ 1.14
PTCH2Q9Y6C5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTCH2Q9Y6C5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTCH2Q9Y6C5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.15■■□□□ 1.14
PTCH2Q9Y6C5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC22.15■■□□□ 1.14
PTCH2Q9Y6C5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.15■■□□□ 1.14
PTCH2Q9Y6C5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTCH2Q9Y6C5 AP000593.1-201ENST00000393668 712 ntBASIC22.15■■□□□ 1.14
PTCH2Q9Y6C5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PTCH2Q9Y6C5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PTCH2Q9Y6C5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.15■■□□□ 1.14
PTCH2Q9Y6C5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.15■■□□□ 1.14
PTCH2Q9Y6C5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC22.15■■□□□ 1.14
PTCH2Q9Y6C5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.15■■□□□ 1.14
PTCH2Q9Y6C5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTCH2Q9Y6C5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.15■■□□□ 1.14
PTCH2Q9Y6C5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTCH2Q9Y6C5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTCH2Q9Y6C5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PTCH2Q9Y6C5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PTCH2Q9Y6C5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PTCH2Q9Y6C5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms