Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 CROCCP5-201ENST00000436658 830 ntBASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 AL591742.1-201ENST00000604433 565 ntBASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.75■□□□□ 0.59
AP4B1Q9Y6B7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 AC068338.2-201ENST00000563278 1430 ntBASIC18.74■□□□□ 0.59
AP4B1Q9Y6B7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 MIR663A-201ENST00000385250 93 ntBASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP4B1Q9Y6B7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 AC018470.1-201ENST00000624790 3129 ntBASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms