Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.36■■□□□ 1.17
CLIC4Q9Y696 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CLIC4Q9Y696 AL020996.1-203ENST00000536896 2307 ntBASIC22.36■■□□□ 1.17
CLIC4Q9Y696 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.36■■□□□ 1.17
CLIC4Q9Y696 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CLIC4Q9Y696 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CLIC4Q9Y696 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.36■■□□□ 1.17
CLIC4Q9Y696 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.36■■□□□ 1.17
CLIC4Q9Y696 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.36■■□□□ 1.17
CLIC4Q9Y696 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.36■■□□□ 1.17
CLIC4Q9Y696 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.36■■□□□ 1.17
CLIC4Q9Y696 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.36■■□□□ 1.17
CLIC4Q9Y696 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CLIC4Q9Y696 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.36■■□□□ 1.17
CLIC4Q9Y696 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CLIC4Q9Y696 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.36■■□□□ 1.17
CLIC4Q9Y696 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
CLIC4Q9Y696 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLIC4Q9Y696 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLIC4Q9Y696 RNF165-205ENST00000588679 2904 ntBASIC22.35■■□□□ 1.17
CLIC4Q9Y696 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.35■■□□□ 1.17
CLIC4Q9Y696 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.35■■□□□ 1.17
CLIC4Q9Y696 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLIC4Q9Y696 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.35■■□□□ 1.17
CLIC4Q9Y696 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.35■■□□□ 1.17
CLIC4Q9Y696 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.35■■□□□ 1.17
CLIC4Q9Y696 HLA-B-256ENST00000639848 1089 ntBASIC22.35■■□□□ 1.17
CLIC4Q9Y696 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLIC4Q9Y696 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLIC4Q9Y696 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CLIC4Q9Y696 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
CLIC4Q9Y696 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
CLIC4Q9Y696 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.34■■□□□ 1.17
CLIC4Q9Y696 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CLIC4Q9Y696 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.34■■□□□ 1.17
CLIC4Q9Y696 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CLIC4Q9Y696 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLIC4Q9Y696 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLIC4Q9Y696 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLIC4Q9Y696 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.34■■□□□ 1.17
CLIC4Q9Y696 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLIC4Q9Y696 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.34■■□□□ 1.17
CLIC4Q9Y696 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLIC4Q9Y696 AL109923.1-201ENST00000618799 583 ntBASIC22.34■■□□□ 1.17
CLIC4Q9Y696 TNXA-203ENST00000507684 2038 ntBASIC22.34■■□□□ 1.17
CLIC4Q9Y696 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLIC4Q9Y696 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CLIC4Q9Y696 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLIC4Q9Y696 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
CLIC4Q9Y696 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
CLIC4Q9Y696 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.33■■□□□ 1.17
CLIC4Q9Y696 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CLIC4Q9Y696 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CLIC4Q9Y696 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CLIC4Q9Y696 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CLIC4Q9Y696 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.33■■□□□ 1.17
CLIC4Q9Y696 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CLIC4Q9Y696 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.33■■□□□ 1.17
CLIC4Q9Y696 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.33■■□□□ 1.17
CLIC4Q9Y696 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.33■■□□□ 1.17
CLIC4Q9Y696 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.33■■□□□ 1.17
CLIC4Q9Y696 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.33■■□□□ 1.17
CLIC4Q9Y696 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
CLIC4Q9Y696 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.33■■□□□ 1.16
CLIC4Q9Y696 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
CLIC4Q9Y696 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.33■■□□□ 1.16
CLIC4Q9Y696 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLIC4Q9Y696 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLIC4Q9Y696 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.32■■□□□ 1.16
CLIC4Q9Y696 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLIC4Q9Y696 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CLIC4Q9Y696 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLIC4Q9Y696 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLIC4Q9Y696 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLIC4Q9Y696 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CLIC4Q9Y696 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.32■■□□□ 1.16
CLIC4Q9Y696 PNMA6B-201ENST00000538162 1200 ntBASIC22.32■■□□□ 1.16
CLIC4Q9Y696 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
CLIC4Q9Y696 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.32■■□□□ 1.16
CLIC4Q9Y696 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.32■■□□□ 1.16
CLIC4Q9Y696 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLIC4Q9Y696 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLIC4Q9Y696 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 AC060766.5-201ENST00000590539 871 ntBASIC22.31■■□□□ 1.16
CLIC4Q9Y696 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 AC104771.1-201ENST00000603335 964 ntBASIC22.31■■□□□ 1.16
CLIC4Q9Y696 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms