Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 AC073195.1-201ENST00000607241 877 ntBASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 AC004264.1-201ENST00000608354 794 ntBASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 AL353708.3-201ENST00000610272 989 ntBASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 AP005212.1-201ENST00000581547 1997 ntBASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PCDHGA3Q9Y5H0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.02■□□□□ 0.63
PCDHGA3Q9Y5H0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.02■□□□□ 0.63
PCDHGA3Q9Y5H0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 AL049796.1-201ENST00000565336 1766 ntBASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 AL020996.1-203ENST00000536896 2307 ntBASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGA3Q9Y5H0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 AC124283.5-201ENST00000624661 1809 ntBASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 HLA-G-202ENST00000376815 851 ntBASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 HLA-G-203ENST00000376818 1127 ntBASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA3Q9Y5H0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 MMP23A-201ENST00000234610 1017 ntBASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA3Q9Y5H0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms