Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.58■□□□□ 0.56
LRCH1Q9Y2L9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LRCH1Q9Y2L9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.58■□□□□ 0.56
LRCH1Q9Y2L9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRCH1Q9Y2L9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRCH1Q9Y2L9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRCH1Q9Y2L9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LRCH1Q9Y2L9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRCH1Q9Y2L9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LRCH1Q9Y2L9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
LRCH1Q9Y2L9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRCH1Q9Y2L9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.58■□□□□ 0.56
LRCH1Q9Y2L9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRCH1Q9Y2L9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 AC091305.1-201ENST00000479476 895 ntBASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 AP001330.3-201ENST00000520123 633 ntBASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 AC027682.1-201ENST00000562846 899 ntBASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 AF213884.3-201ENST00000563833 479 ntBASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 pRNA.6-201ENST00000610482 90 ntBASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 pRNA.5-201ENST00000612139 90 ntBASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 pRNA.11-201ENST00000618423 90 ntBASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 pRNA.13-201ENST00000619112 90 ntBASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH1Q9Y2L9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 AL031598.1-201ENST00000561511 1773 ntBASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 MIR939-201ENST00000401314 82 ntBASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH1Q9Y2L9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 AL161938.1-201ENST00000569833 2180 ntBASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH1Q9Y2L9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms