Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PRDM4Q9UKN5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRDM4Q9UKN5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.19■□□□□ 0.82
PRDM4Q9UKN5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRDM4Q9UKN5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRDM4Q9UKN5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRDM4Q9UKN5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRDM4Q9UKN5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM4Q9UKN5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM4Q9UKN5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 AL356441.2-201ENST00000443009 864 ntBASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
PRDM4Q9UKN5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 DUX4L19-201ENST00000557448 1267 ntBASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms