Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 TCF3P1-201ENST00000423021 1937 ntBASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP6V0A4Q9HBG4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A4Q9HBG4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 AC009237.14-201ENST00000609975 1594 ntBASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 FAM210CP-201ENST00000445714 574 ntBASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 KRT18P16-201ENST00000510337 1294 ntBASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP6V0A4Q9HBG4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 AL353807.1-201ENST00000427475 662 ntBASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 TUBB8P6-201ENST00000436895 1288 ntBASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 TSPY15P-201ENST00000457163 923 ntBASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6V0A4Q9HBG4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
ATP6V0A4Q9HBG4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.77■■□□□ 1.07
ATP6V0A4Q9HBG4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ATP6V0A4Q9HBG4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ATP6V0A4Q9HBG4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 TMEM179-206ENST00000616017 1645 ntBASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A4Q9HBG4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A4Q9HBG4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms