Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.88■□□□□ 0.61
TUBB1Q9H4B7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB1Q9H4B7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB1Q9H4B7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB1Q9H4B7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB1Q9H4B7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.88■□□□□ 0.61
TUBB1Q9H4B7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB1Q9H4B7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 BX276092.2-201ENST00000417668 665 ntBASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB1Q9H4B7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 AL161938.1-201ENST00000569833 2180 ntBASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 AF201337.1-201ENST00000520239 748 ntBASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 RAP2CP1-201ENST00000605103 478 ntBASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 AL049812.1-201ENST00000432563 2267 ntBASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBB1Q9H4B7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 TEX21P-204ENST00000641479 1693 ntBASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBB1Q9H4B7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TUBB1Q9H4B7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms