Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 AC100791.3-201ENST00000617619 330 ntBASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 RALB-208ENST00000631312 311 ntTSL 5 BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 AC141586.3-201ENST00000562166 1838 ntBASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-1Q9BYR8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 AC135050.7-201ENST00000624508 2218 ntBASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 KRT18P68-201ENST00000392293 1000 ntBASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 AC007322.4-201ENST00000509611 723 ntBASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 RARRES2P4-201ENST00000514074 484 ntBASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 AC105020.6-201ENST00000621523 1217 ntBASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 AP003400.6-201ENST00000624698 740 ntBASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 CFTRP2-201ENST00000634304 199 ntBASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC9.92□□□□□ -0.82
KRTAP3-1Q9BYR8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 AL031598.1-201ENST00000561511 1773 ntBASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 AC120498.9-201ENST00000339021 3867 ntBASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms