Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 CROCCP3-202ENST00000420820 1947 ntBASIC17.93■□□□□ 0.46
COPS4Q9BT78 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.93■□□□□ 0.46
COPS4Q9BT78 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
COPS4Q9BT78 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.93■□□□□ 0.46
COPS4Q9BT78 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COPS4Q9BT78 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COPS4Q9BT78 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COPS4Q9BT78 AC019069.1-201ENST00000610008 1333 ntBASIC17.93■□□□□ 0.46
COPS4Q9BT78 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COPS4Q9BT78 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
COPS4Q9BT78 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COPS4Q9BT78 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
COPS4Q9BT78 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
COPS4Q9BT78 AC005332.8-201ENST00000622750 2735 ntBASIC17.92■□□□□ 0.46
COPS4Q9BT78 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
COPS4Q9BT78 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COPS4Q9BT78 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.92■□□□□ 0.46
COPS4Q9BT78 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COPS4Q9BT78 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COPS4Q9BT78 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.92■□□□□ 0.46
COPS4Q9BT78 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.92■□□□□ 0.46
COPS4Q9BT78 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.92■□□□□ 0.46
COPS4Q9BT78 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.92■□□□□ 0.46
COPS4Q9BT78 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.92■□□□□ 0.46
COPS4Q9BT78 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
COPS4Q9BT78 FAM21FP-204ENST00000608637 956 ntBASIC17.92■□□□□ 0.46
COPS4Q9BT78 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
COPS4Q9BT78 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COPS4Q9BT78 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.92■□□□□ 0.46
COPS4Q9BT78 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.92■□□□□ 0.46
COPS4Q9BT78 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPS4Q9BT78 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.91■□□□□ 0.46
COPS4Q9BT78 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.91■□□□□ 0.46
COPS4Q9BT78 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.91■□□□□ 0.46
COPS4Q9BT78 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COPS4Q9BT78 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.91■□□□□ 0.46
COPS4Q9BT78 AC091799.1-201ENST00000422823 811 ntBASIC17.91■□□□□ 0.46
COPS4Q9BT78 AC007322.3-201ENST00000426526 701 ntBASIC17.91■□□□□ 0.46
COPS4Q9BT78 AC034268.1-201ENST00000441047 882 ntBASIC17.91■□□□□ 0.46
COPS4Q9BT78 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
COPS4Q9BT78 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.91■□□□□ 0.46
COPS4Q9BT78 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 KRT18P61-201ENST00000585825 1298 ntBASIC17.91■□□□□ 0.46
COPS4Q9BT78 NTF6G-201ENST00000591094 616 ntBASIC17.91■□□□□ 0.46
COPS4Q9BT78 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.91■□□□□ 0.46
COPS4Q9BT78 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
COPS4Q9BT78 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.91■□□□□ 0.46
COPS4Q9BT78 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
COPS4Q9BT78 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.91■□□□□ 0.46
COPS4Q9BT78 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPS4Q9BT78 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COPS4Q9BT78 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPS4Q9BT78 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.9■□□□□ 0.46
COPS4Q9BT78 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPS4Q9BT78 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPS4Q9BT78 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.9■□□□□ 0.46
COPS4Q9BT78 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.9■□□□□ 0.46
COPS4Q9BT78 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COPS4Q9BT78 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COPS4Q9BT78 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COPS4Q9BT78 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.9■□□□□ 0.46
COPS4Q9BT78 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPS4Q9BT78 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPS4Q9BT78 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COPS4Q9BT78 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.9■□□□□ 0.46
COPS4Q9BT78 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COPS4Q9BT78 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms