Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.57■□□□□ 0.72
CPNE1Q99829 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE1Q99829 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE1Q99829 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE1Q99829 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.57■□□□□ 0.72
CPNE1Q99829 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE1Q99829 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.57■□□□□ 0.72
CPNE1Q99829 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.57■□□□□ 0.72
CPNE1Q99829 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CPNE1Q99829 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.57■□□□□ 0.72
CPNE1Q99829 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
CPNE1Q99829 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.57■□□□□ 0.72
CPNE1Q99829 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.57■□□□□ 0.72
CPNE1Q99829 AF201337.1-201ENST00000520239 748 ntBASIC19.57■□□□□ 0.72
CPNE1Q99829 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE1Q99829 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE1Q99829 AC105036.2-201ENST00000569468 176 ntBASIC19.57■□□□□ 0.72
CPNE1Q99829 AC080038.1-201ENST00000611274 1154 ntBASIC19.57■□□□□ 0.72
CPNE1Q99829 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CPNE1Q99829 AC073111.5-205ENST00000641717 521 ntBASIC19.57■□□□□ 0.72
CPNE1Q99829 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE1Q99829 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE1Q99829 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE1Q99829 TFP1-202ENST00000475455 1573 ntBASIC19.57■□□□□ 0.72
CPNE1Q99829 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.57■□□□□ 0.72
CPNE1Q99829 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE1Q99829 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE1Q99829 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE1Q99829 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE1Q99829 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE1Q99829 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE1Q99829 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE1Q99829 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE1Q99829 AC073210.2-201ENST00000430369 194 ntBASIC19.56■□□□□ 0.72
CPNE1Q99829 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.56■□□□□ 0.72
CPNE1Q99829 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.56■□□□□ 0.72
CPNE1Q99829 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.56■□□□□ 0.72
CPNE1Q99829 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.56■□□□□ 0.72
CPNE1Q99829 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE1Q99829 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE1Q99829 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE1Q99829 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE1Q99829 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.56■□□□□ 0.72
CPNE1Q99829 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE1Q99829 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE1Q99829 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.56■□□□□ 0.72
CPNE1Q99829 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE1Q99829 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE1Q99829 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE1Q99829 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CPNE1Q99829 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.55■□□□□ 0.72
CPNE1Q99829 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CPNE1Q99829 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE1Q99829 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE1Q99829 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.55■□□□□ 0.72
CPNE1Q99829 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.55■□□□□ 0.72
CPNE1Q99829 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.55■□□□□ 0.72
CPNE1Q99829 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CPNE1Q99829 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.55■□□□□ 0.72
CPNE1Q99829 AL390719.1-204ENST00000412397 1219 ntBASIC19.55■□□□□ 0.72
CPNE1Q99829 BX276092.2-201ENST00000417668 665 ntBASIC19.55■□□□□ 0.72
CPNE1Q99829 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.55■□□□□ 0.72
CPNE1Q99829 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.55■□□□□ 0.72
CPNE1Q99829 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE1Q99829 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.55■□□□□ 0.72
CPNE1Q99829 AL050303.2-201ENST00000619798 666 ntBASIC19.55■□□□□ 0.72
CPNE1Q99829 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.55■□□□□ 0.72
CPNE1Q99829 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE1Q99829 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.55■□□□□ 0.72
CPNE1Q99829 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CPNE1Q99829 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE1Q99829 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE1Q99829 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CPNE1Q99829 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE1Q99829 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CPNE1Q99829 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CPNE1Q99829 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.54■□□□□ 0.72
CPNE1Q99829 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.54■□□□□ 0.72
CPNE1Q99829 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE1Q99829 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE1Q99829 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE1Q99829 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
CPNE1Q99829 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.54■□□□□ 0.72
CPNE1Q99829 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE1Q99829 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
CPNE1Q99829 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.54■□□□□ 0.72
CPNE1Q99829 AC092437.1-201ENST00000624794 1048 ntBASIC19.54■□□□□ 0.72
CPNE1Q99829 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE1Q99829 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CPNE1Q99829 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.54■□□□□ 0.72
CPNE1Q99829 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE1Q99829 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.54■□□□□ 0.72
CPNE1Q99829 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CPNE1Q99829 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CPNE1Q99829 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.54■□□□□ 0.72
CPNE1Q99829 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE1Q99829 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE1Q99829 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE1Q99829 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE1Q99829 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms