Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.97■□□□□ 0.47
TIMP4Q99727 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP4Q99727 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.97■□□□□ 0.47
TIMP4Q99727 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP4Q99727 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP4Q99727 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
TIMP4Q99727 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.97■□□□□ 0.47
TIMP4Q99727 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.97■□□□□ 0.47
TIMP4Q99727 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.97■□□□□ 0.47
TIMP4Q99727 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.97■□□□□ 0.47
TIMP4Q99727 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.97■□□□□ 0.47
TIMP4Q99727 Z99916.2-201ENST00000604037 246 ntBASIC17.97■□□□□ 0.47
TIMP4Q99727 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP4Q99727 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.97■□□□□ 0.47
TIMP4Q99727 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP4Q99727 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TIMP4Q99727 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP4Q99727 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP4Q99727 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
TIMP4Q99727 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.96■□□□□ 0.47
TIMP4Q99727 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.96■□□□□ 0.47
TIMP4Q99727 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TIMP4Q99727 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.96■□□□□ 0.47
TIMP4Q99727 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.96■□□□□ 0.47
TIMP4Q99727 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.96■□□□□ 0.47
TIMP4Q99727 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.96■□□□□ 0.47
TIMP4Q99727 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.96■□□□□ 0.47
TIMP4Q99727 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.96■□□□□ 0.47
TIMP4Q99727 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TIMP4Q99727 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 DPP3P2-201ENST00000416030 1696 ntBASIC17.96■□□□□ 0.47
TIMP4Q99727 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP4Q99727 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.95■□□□□ 0.46
TIMP4Q99727 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.95■□□□□ 0.46
TIMP4Q99727 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TIMP4Q99727 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.95■□□□□ 0.46
TIMP4Q99727 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.95■□□□□ 0.46
TIMP4Q99727 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.95■□□□□ 0.46
TIMP4Q99727 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TIMP4Q99727 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TIMP4Q99727 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TIMP4Q99727 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP4Q99727 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TIMP4Q99727 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TIMP4Q99727 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMP4Q99727 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TIMP4Q99727 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.94■□□□□ 0.46
TIMP4Q99727 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMP4Q99727 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMP4Q99727 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
TIMP4Q99727 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.94■□□□□ 0.46
TIMP4Q99727 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TIMP4Q99727 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.94■□□□□ 0.46
TIMP4Q99727 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMP4Q99727 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.94■□□□□ 0.46
TIMP4Q99727 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.94■□□□□ 0.46
TIMP4Q99727 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
TIMP4Q99727 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.93■□□□□ 0.46
TIMP4Q99727 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TIMP4Q99727 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.93■□□□□ 0.46
TIMP4Q99727 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.93■□□□□ 0.46
TIMP4Q99727 AC005332.7-201ENST00000614046 2005 ntBASIC17.93■□□□□ 0.46
TIMP4Q99727 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP4Q99727 AP000974.1-201ENST00000623909 2387 ntBASIC17.93■□□□□ 0.46
TIMP4Q99727 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP4Q99727 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP4Q99727 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP4Q99727 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.93■□□□□ 0.46
TIMP4Q99727 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.93■□□□□ 0.46
TIMP4Q99727 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms