Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 AL161938.1-201ENST00000569833 2180 ntBASIC18.43■□□□□ 0.54
NR1H4Q96RI1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NR1H4Q96RI1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 GUSBP5-201ENST00000418136 578 ntBASIC18.42■□□□□ 0.54
NR1H4Q96RI1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.42■□□□□ 0.54
NR1H4Q96RI1 AC141586.5-201ENST00000624546 2050 ntBASIC18.42■□□□□ 0.54
NR1H4Q96RI1 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.41■□□□□ 0.54
NR1H4Q96RI1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 Z98044.1-201ENST00000632503 1764 ntBASIC18.41■□□□□ 0.54
NR1H4Q96RI1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NR1H4Q96RI1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 AC093525.10-201ENST00000625130 1569 ntBASIC18.4■□□□□ 0.54
NR1H4Q96RI1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 PKD1P1-201ENST00000458669 6805 ntBASIC18.4■□□□□ 0.54
NR1H4Q96RI1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.4■□□□□ 0.54
NR1H4Q96RI1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
NR1H4Q96RI1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.39■□□□□ 0.54
NR1H4Q96RI1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms