Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMARCC1Q92922 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.14■■□□□ 1.62
SMARCC1Q92922 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMARCC1Q92922 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SMARCC1Q92922 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMARCC1Q92922 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SMARCC1Q92922 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
SMARCC1Q92922 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SMARCC1Q92922 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SMARCC1Q92922 DAP-202ENST00000432074 1048 ntTSL 2 BASIC25.14■■□□□ 1.62
SMARCC1Q92922 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMARCC1Q92922 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SMARCC1Q92922 NME1-207ENST00000480143 964 ntTSL 2 BASIC25.14■■□□□ 1.62
SMARCC1Q92922 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC25.14■■□□□ 1.62
SMARCC1Q92922 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC25.14■■□□□ 1.62
SMARCC1Q92922 AL160286.2-201ENST00000567150 934 ntBASIC25.14■■□□□ 1.62
SMARCC1Q92922 AC093458.2-201ENST00000623150 629 ntBASIC25.14■■□□□ 1.62
SMARCC1Q92922 AC116407.4-201ENST00000623319 1061 ntBASIC25.14■■□□□ 1.62
SMARCC1Q92922 AL023973.1-201ENST00000624619 620 ntBASIC25.14■■□□□ 1.62
SMARCC1Q92922 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC25.14■■□□□ 1.62
SMARCC1Q92922 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC25.14■■□□□ 1.62
SMARCC1Q92922 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMARCC1Q92922 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.13■■□□□ 1.61
SMARCC1Q92922 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SMARCC1Q92922 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
SMARCC1Q92922 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SMARCC1Q92922 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
SMARCC1Q92922 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC25.13■■□□□ 1.61
SMARCC1Q92922 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC25.13■■□□□ 1.61
SMARCC1Q92922 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMARCC1Q92922 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SMARCC1Q92922 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMARCC1Q92922 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
SMARCC1Q92922 AC005332.1-201ENST00000577698 1310 ntBASIC25.12■■□□□ 1.61
SMARCC1Q92922 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCC1Q92922 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCC1Q92922 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
SMARCC1Q92922 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC25.12■■□□□ 1.61
SMARCC1Q92922 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCC1Q92922 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
SMARCC1Q92922 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCC1Q92922 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC25.12■■□□□ 1.61
SMARCC1Q92922 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC25.12■■□□□ 1.61
SMARCC1Q92922 PRSS44-201ENST00000515154 1146 ntBASIC25.12■■□□□ 1.61
SMARCC1Q92922 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC25.12■■□□□ 1.61
SMARCC1Q92922 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
SMARCC1Q92922 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCC1Q92922 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCC1Q92922 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.12■■□□□ 1.61
SMARCC1Q92922 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
SMARCC1Q92922 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMARCC1Q92922 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMARCC1Q92922 AL450487.1-201ENST00000426799 995 ntBASIC25.11■■□□□ 1.61
SMARCC1Q92922 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC25.11■■□□□ 1.61
SMARCC1Q92922 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC25.11■■□□□ 1.61
SMARCC1Q92922 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SMARCC1Q92922 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC25.11■■□□□ 1.61
SMARCC1Q92922 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC25.11■■□□□ 1.61
SMARCC1Q92922 BID-203ENST00000399765 1879 ntTSL 2 BASIC25.11■■□□□ 1.61
SMARCC1Q92922 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMARCC1Q92922 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC25.11■■□□□ 1.61
SMARCC1Q92922 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SMARCC1Q92922 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
SMARCC1Q92922 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
SMARCC1Q92922 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMARCC1Q92922 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMARCC1Q92922 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMARCC1Q92922 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC1Q92922 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC1Q92922 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC1Q92922 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC1Q92922 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC1Q92922 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC1Q92922 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC1Q92922 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC1Q92922 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC25.09■■□□□ 1.61
SMARCC1Q92922 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
SMARCC1Q92922 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC25.09■■□□□ 1.61
SMARCC1Q92922 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC1Q92922 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC25.09■■□□□ 1.61
SMARCC1Q92922 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC1Q92922 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
SMARCC1Q92922 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC1Q92922 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
SMARCC1Q92922 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC1Q92922 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC1Q92922 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC1Q92922 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
SMARCC1Q92922 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SMARCC1Q92922 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC25.08■■□□□ 1.61
SMARCC1Q92922 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC25.08■■□□□ 1.61
SMARCC1Q92922 HCG4P8-203ENST00000443049 980 ntBASIC25.08■■□□□ 1.61
SMARCC1Q92922 AP003041.3-201ENST00000527151 707 ntBASIC25.08■■□□□ 1.61
SMARCC1Q92922 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SMARCC1Q92922 ETFA-216ENST00000560726 942 ntTSL 3 BASIC25.08■■□□□ 1.61
SMARCC1Q92922 CKBP1-201ENST00000565489 1086 ntBASIC25.08■■□□□ 1.61
SMARCC1Q92922 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC25.08■■□□□ 1.61
SMARCC1Q92922 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMARCC1Q92922 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMARCC1Q92922 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms