Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 YBX1P10-201ENST00000444752 975 ntBASIC21.09■□□□□ 0.97
SEMA4DQ92854 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.09■□□□□ 0.97
SEMA4DQ92854 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA4DQ92854 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.09■□□□□ 0.97
SEMA4DQ92854 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SEMA4DQ92854 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA4DQ92854 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.09■□□□□ 0.97
SEMA4DQ92854 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA4DQ92854 Z82202.1-201ENST00000623446 1880 ntBASIC21.09■□□□□ 0.97
SEMA4DQ92854 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA4DQ92854 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.09■□□□□ 0.97
SEMA4DQ92854 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA4DQ92854 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA4DQ92854 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.08■□□□□ 0.97
SEMA4DQ92854 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA4DQ92854 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.08■□□□□ 0.97
SEMA4DQ92854 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA4DQ92854 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
SEMA4DQ92854 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA4DQ92854 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SEMA4DQ92854 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA4DQ92854 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA4DQ92854 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA4DQ92854 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA4DQ92854 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.08■□□□□ 0.97
SEMA4DQ92854 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA4DQ92854 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA4DQ92854 AL023875.1-201ENST00000640777 796 ntBASIC21.08■□□□□ 0.97
SEMA4DQ92854 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
SEMA4DQ92854 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SEMA4DQ92854 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SEMA4DQ92854 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
SEMA4DQ92854 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SEMA4DQ92854 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SEMA4DQ92854 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA4DQ92854 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.07■□□□□ 0.96
SEMA4DQ92854 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SEMA4DQ92854 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA4DQ92854 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA4DQ92854 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SEMA4DQ92854 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA4DQ92854 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA4DQ92854 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.07■□□□□ 0.96
SEMA4DQ92854 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.07■□□□□ 0.96
SEMA4DQ92854 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.07■□□□□ 0.96
SEMA4DQ92854 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA4DQ92854 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.07■□□□□ 0.96
SEMA4DQ92854 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.07■□□□□ 0.96
SEMA4DQ92854 KRT18P16-201ENST00000510337 1294 ntBASIC21.07■□□□□ 0.96
SEMA4DQ92854 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.07■□□□□ 0.96
SEMA4DQ92854 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA4DQ92854 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA4DQ92854 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SEMA4DQ92854 RN7SL471P-201ENST00000580476 299 ntBASIC21.07■□□□□ 0.96
SEMA4DQ92854 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.07■□□□□ 0.96
SEMA4DQ92854 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA4DQ92854 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.07■□□□□ 0.96
SEMA4DQ92854 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.07■□□□□ 0.96
SEMA4DQ92854 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA4DQ92854 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.07■□□□□ 0.96
SEMA4DQ92854 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.07■□□□□ 0.96
SEMA4DQ92854 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA4DQ92854 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA4DQ92854 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA4DQ92854 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
SEMA4DQ92854 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.06■□□□□ 0.96
SEMA4DQ92854 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA4DQ92854 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA4DQ92854 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA4DQ92854 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.06■□□□□ 0.96
SEMA4DQ92854 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.06■□□□□ 0.96
SEMA4DQ92854 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SEMA4DQ92854 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA4DQ92854 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.06■□□□□ 0.96
SEMA4DQ92854 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA4DQ92854 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA4DQ92854 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA4DQ92854 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA4DQ92854 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA4DQ92854 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA4DQ92854 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
SEMA4DQ92854 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA4DQ92854 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA4DQ92854 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA4DQ92854 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.05■□□□□ 0.96
SEMA4DQ92854 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA4DQ92854 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SEMA4DQ92854 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA4DQ92854 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SEMA4DQ92854 PRKY-204ENST00000533551 1019 ntBASIC21.05■□□□□ 0.96
SEMA4DQ92854 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA4DQ92854 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.05■□□□□ 0.96
SEMA4DQ92854 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA4DQ92854 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SEMA4DQ92854 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA4DQ92854 NBPF21P-201ENST00000425093 1451 ntBASIC21.05■□□□□ 0.96
SEMA4DQ92854 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA4DQ92854 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA4DQ92854 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
SEMA4DQ92854 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms