Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CNOT9Q92600 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CNOT9Q92600 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT9Q92600 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.04■□□□□ 0.48
CNOT9Q92600 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT9Q92600 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT9Q92600 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT9Q92600 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT9Q92600 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.04■□□□□ 0.48
CNOT9Q92600 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.04■□□□□ 0.48
CNOT9Q92600 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.04■□□□□ 0.48
CNOT9Q92600 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.04■□□□□ 0.48
CNOT9Q92600 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.04■□□□□ 0.48
CNOT9Q92600 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CNOT9Q92600 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.04■□□□□ 0.48
CNOT9Q92600 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT9Q92600 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT9Q92600 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT9Q92600 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.04■□□□□ 0.48
CNOT9Q92600 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT9Q92600 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT9Q92600 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CNOT9Q92600 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CNOT9Q92600 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.03■□□□□ 0.48
CNOT9Q92600 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT9Q92600 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.03■□□□□ 0.48
CNOT9Q92600 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CNOT9Q92600 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT9Q92600 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT9Q92600 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CNOT9Q92600 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.03■□□□□ 0.48
CNOT9Q92600 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.03■□□□□ 0.48
CNOT9Q92600 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.03■□□□□ 0.48
CNOT9Q92600 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.03■□□□□ 0.48
CNOT9Q92600 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.03■□□□□ 0.48
CNOT9Q92600 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT9Q92600 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CNOT9Q92600 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT9Q92600 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT9Q92600 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.03■□□□□ 0.48
CNOT9Q92600 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT9Q92600 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT9Q92600 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT9Q92600 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT9Q92600 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT9Q92600 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.03■□□□□ 0.48
CNOT9Q92600 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT9Q92600 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT9Q92600 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT9Q92600 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT9Q92600 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT9Q92600 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CNOT9Q92600 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT9Q92600 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT9Q92600 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT9Q92600 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT9Q92600 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.02■□□□□ 0.48
CNOT9Q92600 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.02■□□□□ 0.48
CNOT9Q92600 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.02■□□□□ 0.48
CNOT9Q92600 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.02■□□□□ 0.48
CNOT9Q92600 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.02■□□□□ 0.48
CNOT9Q92600 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.02■□□□□ 0.48
CNOT9Q92600 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.02■□□□□ 0.48
CNOT9Q92600 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.02■□□□□ 0.48
CNOT9Q92600 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.02■□□□□ 0.48
CNOT9Q92600 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT9Q92600 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.02■□□□□ 0.48
CNOT9Q92600 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNOT9Q92600 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNOT9Q92600 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CNOT9Q92600 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.02■□□□□ 0.47
CNOT9Q92600 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
CNOT9Q92600 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CNOT9Q92600 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT9Q92600 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT9Q92600 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT9Q92600 AL020996.1-203ENST00000536896 2307 ntBASIC18.01■□□□□ 0.47
CNOT9Q92600 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT9Q92600 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CNOT9Q92600 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
CNOT9Q92600 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.01■□□□□ 0.47
CNOT9Q92600 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.01■□□□□ 0.47
CNOT9Q92600 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT9Q92600 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT9Q92600 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT9Q92600 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT9Q92600 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT9Q92600 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT9Q92600 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT9Q92600 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT9Q92600 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT9Q92600 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.01■□□□□ 0.47
CNOT9Q92600 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT9Q92600 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.01■□□□□ 0.47
CNOT9Q92600 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.01■□□□□ 0.47
CNOT9Q92600 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
CNOT9Q92600 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.01■□□□□ 0.47
CNOT9Q92600 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT9Q92600 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.01■□□□□ 0.47
CNOT9Q92600 SOX15-203ENST00000570788 1093 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms