Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 C2orf69P4-201ENST00000565394 541 ntBASIC20.01■□□□□ 0.79
SCG3Q8WXD2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCG3Q8WXD2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCG3Q8WXD2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20■□□□□ 0.79
SCG3Q8WXD2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SCG3Q8WXD2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
SCG3Q8WXD2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20■□□□□ 0.79
SCG3Q8WXD2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SCG3Q8WXD2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCG3Q8WXD2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCG3Q8WXD2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCG3Q8WXD2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCG3Q8WXD2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SCG3Q8WXD2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCG3Q8WXD2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20■□□□□ 0.79
SCG3Q8WXD2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20■□□□□ 0.79
SCG3Q8WXD2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SCG3Q8WXD2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20■□□□□ 0.79
SCG3Q8WXD2 PTBP1P-201ENST00000554374 1601 ntBASIC20■□□□□ 0.79
SCG3Q8WXD2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCG3Q8WXD2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCG3Q8WXD2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20■□□□□ 0.79
SCG3Q8WXD2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SCG3Q8WXD2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCG3Q8WXD2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SCG3Q8WXD2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 AC008403.3-201ENST00000598924 454 ntBASIC19.99■□□□□ 0.79
SCG3Q8WXD2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.99■□□□□ 0.79
SCG3Q8WXD2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCG3Q8WXD2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 SOX15-203ENST00000570788 1093 ntBASIC19.98■□□□□ 0.79
SCG3Q8WXD2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
SCG3Q8WXD2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCG3Q8WXD2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms