Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
PTCD2Q8WV60 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 AC120498.8-201ENST00000614275 531 ntBASIC19.82■□□□□ 0.76
PTCD2Q8WV60 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 Z99916.3-201ENST00000623422 1080 ntBASIC19.82■□□□□ 0.76
PTCD2Q8WV60 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCD2Q8WV60 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.81■□□□□ 0.76
PTCD2Q8WV60 AC116562.4-201ENST00000641316 2276 ntBASIC19.81■□□□□ 0.76
PTCD2Q8WV60 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 AL359736.2-201ENST00000621992 437 ntBASIC19.81■□□□□ 0.76
PTCD2Q8WV60 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCD2Q8WV60 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 KRT17P3-201ENST00000420566 1262 ntBASIC19.8■□□□□ 0.76
PTCD2Q8WV60 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 C1QBPP2-201ENST00000528754 825 ntBASIC19.8■□□□□ 0.76
PTCD2Q8WV60 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 RN7SL471P-201ENST00000580476 299 ntBASIC19.8■□□□□ 0.76
PTCD2Q8WV60 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTCD2Q8WV60 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTCD2Q8WV60 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCD2Q8WV60 TFP1-202ENST00000475455 1573 ntBASIC19.78■□□□□ 0.76
PTCD2Q8WV60 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PTCD2Q8WV60 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms