Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.7■■□□□ 1.06
KLHDC9Q8NEP7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KLHDC9Q8NEP7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KLHDC9Q8NEP7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.7■■□□□ 1.06
KLHDC9Q8NEP7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.7■■□□□ 1.06
KLHDC9Q8NEP7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.7■■□□□ 1.06
KLHDC9Q8NEP7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
KLHDC9Q8NEP7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
KLHDC9Q8NEP7 IER3-202ENST00000376377 1350 ntBASIC21.7■■□□□ 1.06
KLHDC9Q8NEP7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
KLHDC9Q8NEP7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KLHDC9Q8NEP7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.7■■□□□ 1.06
KLHDC9Q8NEP7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 KRT18P48-201ENST00000434763 852 ntBASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.69■■□□□ 1.06
KLHDC9Q8NEP7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 AL671277.2-201ENST00000458060 996 ntBASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 SMG8-203ENST00000578922 2178 ntBASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KLHDC9Q8NEP7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 PRSS44-201ENST00000515154 1146 ntBASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 AC140113.3-201ENST00000605663 199 ntBASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 AC008622.2-201ENST00000617006 1229 ntBASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 AC116407.4-201ENST00000623319 1061 ntBASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 AL023973.1-201ENST00000624619 620 ntBASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
KLHDC9Q8NEP7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 AL359075.1-203ENST00000462729 1002 ntBASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 CKBP1-201ENST00000565489 1086 ntBASIC21.66■■□□□ 1.06
KLHDC9Q8NEP7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms