Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 AC005829.2-201ENST00000571422 1056 ntBASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 AL158211.5-201ENST00000623583 2518 ntBASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
ZNF439Q8NDP4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF439Q8NDP4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.21■□□□□ 0.18
ZNF439Q8NDP4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.21■□□□□ 0.18
ZNF439Q8NDP4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 AL138781.1-201ENST00000566567 1274 ntBASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF439Q8NDP4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 AC090192.1-201ENST00000517740 490 ntBASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 AC098934.4-201ENST00000564127 592 ntBASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 AL109923.1-201ENST00000618799 583 ntBASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF439Q8NDP4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 AL390719.1-204ENST00000412397 1219 ntBASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 AC097658.1-201ENST00000475555 843 ntBASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms