Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC63Q8NA47 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC63Q8NA47 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC63Q8NA47 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC63Q8NA47 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 PGM5P4-201ENST00000421970 445 ntBASIC19.84■□□□□ 0.77
CCDC63Q8NA47 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC63Q8NA47 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC63Q8NA47 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CCDC63Q8NA47 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC63Q8NA47 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC63Q8NA47 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC63Q8NA47 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CCDC63Q8NA47 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC63Q8NA47 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC63Q8NA47 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC63Q8NA47 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC63Q8NA47 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC63Q8NA47 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.83■□□□□ 0.77
CCDC63Q8NA47 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.83■□□□□ 0.77
CCDC63Q8NA47 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC63Q8NA47 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CCDC63Q8NA47 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC63Q8NA47 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC63Q8NA47 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC63Q8NA47 FZD10-202ENST00000539839 3282 ntBASIC19.83■□□□□ 0.76
CCDC63Q8NA47 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC63Q8NA47 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CCDC63Q8NA47 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC63Q8NA47 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC63Q8NA47 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 AC097381.1-201ENST00000429019 1296 ntBASIC19.82■□□□□ 0.76
CCDC63Q8NA47 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC63Q8NA47 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC63Q8NA47 AC019069.1-201ENST00000610008 1333 ntBASIC19.81■□□□□ 0.76
CCDC63Q8NA47 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC63Q8NA47 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC63Q8NA47 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC63Q8NA47 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC63Q8NA47 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC63Q8NA47 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC63Q8NA47 SLC7A5P1-201ENST00000568957 537 ntBASIC19.81■□□□□ 0.76
CCDC63Q8NA47 AL356652.1-201ENST00000615962 565 ntBASIC19.81■□□□□ 0.76
CCDC63Q8NA47 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC63Q8NA47 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC63Q8NA47 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC63Q8NA47 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC63Q8NA47 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC63Q8NA47 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC63Q8NA47 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC63Q8NA47 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC63Q8NA47 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC63Q8NA47 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC63Q8NA47 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC63Q8NA47 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms