Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN22Q8N7P3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN22Q8N7P3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN22Q8N7P3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN22Q8N7P3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN22Q8N7P3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.83■□□□□ 0.45
CLDN22Q8N7P3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN22Q8N7P3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN22Q8N7P3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN22Q8N7P3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN22Q8N7P3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN22Q8N7P3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN22Q8N7P3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN22Q8N7P3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN22Q8N7P3 LINC01465-201ENST00000408887 1940 ntBASIC17.83■□□□□ 0.44
CLDN22Q8N7P3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN22Q8N7P3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN22Q8N7P3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN22Q8N7P3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.83■□□□□ 0.44
CLDN22Q8N7P3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN22Q8N7P3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN22Q8N7P3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.83■□□□□ 0.44
CLDN22Q8N7P3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN22Q8N7P3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN22Q8N7P3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN22Q8N7P3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN22Q8N7P3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 MIR663A-201ENST00000385250 93 ntBASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 RAP2CP1-201ENST00000605103 478 ntBASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 AL589743.5-201ENST00000616611 1050 ntBASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN22Q8N7P3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 C2orf69P4-201ENST00000565394 541 ntBASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms