Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 DUSP5P1-201ENST00000441325 1139 ntBASIC21.23■□□□□ 0.99
HERC6Q8IVU3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 AC011558.1-201ENST00000623459 338 ntBASIC21.23■□□□□ 0.99
HERC6Q8IVU3 AC141257.4-201ENST00000634557 245 ntBASIC21.23■□□□□ 0.99
HERC6Q8IVU3 AC136944.6-201ENST00000634818 245 ntBASIC21.23■□□□□ 0.99
HERC6Q8IVU3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 IER3-202ENST00000376377 1350 ntBASIC21.23■□□□□ 0.99
HERC6Q8IVU3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 AL121603.2-201ENST00000557373 2117 ntBASIC21.22■□□□□ 0.99
HERC6Q8IVU3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 AC018553.1-201ENST00000616682 1458 ntBASIC21.22■□□□□ 0.99
HERC6Q8IVU3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 AL049796.1-201ENST00000565336 1766 ntBASIC21.22■□□□□ 0.99
HERC6Q8IVU3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HERC6Q8IVU3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.21■□□□□ 0.99
HERC6Q8IVU3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HERC6Q8IVU3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HERC6Q8IVU3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HERC6Q8IVU3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HERC6Q8IVU3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HERC6Q8IVU3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HERC6Q8IVU3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.2■□□□□ 0.98
HERC6Q8IVU3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HERC6Q8IVU3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HERC6Q8IVU3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.2■□□□□ 0.98
HERC6Q8IVU3 AC093458.2-201ENST00000623150 629 ntBASIC21.2■□□□□ 0.98
HERC6Q8IVU3 HLA-A-209ENST00000638375 975 ntBASIC21.2■□□□□ 0.98
HERC6Q8IVU3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HERC6Q8IVU3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HERC6Q8IVU3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
HERC6Q8IVU3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HERC6Q8IVU3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HERC6Q8IVU3 AC092338.2-201ENST00000568827 1415 ntBASIC21.2■□□□□ 0.98
HERC6Q8IVU3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.2■□□□□ 0.98
HERC6Q8IVU3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 AC026396.1-201ENST00000419388 421 ntBASIC21.19■□□□□ 0.98
HERC6Q8IVU3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms