Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUDCD3Q8IVD9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUDCD3Q8IVD9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUDCD3Q8IVD9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 PHGDH-210ENST00000641115 1638 ntBASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 HCG11-201ENST00000411553 5696 ntBASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 HLA-G-202ENST00000376815 851 ntBASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 HLA-G-203ENST00000376818 1127 ntBASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 AL162412.1-201ENST00000567129 965 ntBASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 AC010536.3-201ENST00000620306 533 ntBASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD3Q8IVD9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NUDCD3Q8IVD9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 MCRIP2P1-201ENST00000394346 511 ntBASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 CROCCP3-202ENST00000420820 1947 ntBASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.41■□□□□ 0.7
NUDCD3Q8IVD9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 KRT18P61-201ENST00000585825 1298 ntBASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD3Q8IVD9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms