Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 EGLN1P1-201ENST00000531623 762 ntBASIC20.77■□□□□ 0.92
RNF135Q8IUD6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
RNF135Q8IUD6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 AC006128.1-201ENST00000624704 1661 ntBASIC20.76■□□□□ 0.91
RNF135Q8IUD6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF135Q8IUD6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 AL031133.1-201ENST00000406807 723 ntBASIC20.75■□□□□ 0.91
RNF135Q8IUD6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 AC023632.3-201ENST00000521633 145 ntBASIC20.75■□□□□ 0.91
RNF135Q8IUD6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.75■□□□□ 0.91
RNF135Q8IUD6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 MYC-208ENST00000641036 567 ntBASIC20.75■□□□□ 0.91
RNF135Q8IUD6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 FP700111.2-201ENST00000619190 1892 ntBASIC20.75■□□□□ 0.91
RNF135Q8IUD6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF135Q8IUD6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 DUSP5P1-201ENST00000441325 1139 ntBASIC20.74■□□□□ 0.91
RNF135Q8IUD6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 AP000550.4-202ENST00000639755 178 ntBASIC20.74■□□□□ 0.91
RNF135Q8IUD6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF135Q8IUD6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF135Q8IUD6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
RNF135Q8IUD6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RNF135Q8IUD6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF135Q8IUD6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF135Q8IUD6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF135Q8IUD6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF135Q8IUD6 TSPY14P-201ENST00000303979 915 ntBASIC20.73■□□□□ 0.91
RNF135Q8IUD6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF135Q8IUD6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF135Q8IUD6 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.73■□□□□ 0.91
RNF135Q8IUD6 AL121603.2-201ENST00000557373 2117 ntBASIC20.73■□□□□ 0.91
RNF135Q8IUD6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF135Q8IUD6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF135Q8IUD6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RNF135Q8IUD6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms