Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 AC010536.3-201ENST00000620306 533 ntBASIC20.2■□□□□ 0.82
CCDC25Q86WR0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 KRT8P20-201ENST00000423953 1409 ntBASIC20.19■□□□□ 0.82
CCDC25Q86WR0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC25Q86WR0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.18■□□□□ 0.82
CCDC25Q86WR0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC25Q86WR0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC25Q86WR0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms