Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF44Q7L0R7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RNF44Q7L0R7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF44Q7L0R7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.79■□□□□ 0.6
RNF44Q7L0R7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 AC008550.1-201ENST00000511500 884 ntBASIC18.79■□□□□ 0.6
RNF44Q7L0R7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 RARRES2P10-201ENST00000564312 460 ntBASIC18.79■□□□□ 0.6
RNF44Q7L0R7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF44Q7L0R7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF44Q7L0R7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 AC093827.2-201ENST00000512654 315 ntBASIC18.77■□□□□ 0.6
RNF44Q7L0R7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 TMEM179-206ENST00000616017 1645 ntBASIC18.77■□□□□ 0.6
RNF44Q7L0R7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
RNF44Q7L0R7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.77■□□□□ 0.59
RNF44Q7L0R7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF44Q7L0R7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
RNF44Q7L0R7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF44Q7L0R7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF44Q7L0R7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF44Q7L0R7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RNF44Q7L0R7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF44Q7L0R7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF44Q7L0R7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms