Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PTCHD4Q6ZW05 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 AL162412.1-201ENST00000567129 965 ntBASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PTCHD4Q6ZW05 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 AC026271.2-201ENST00000428091 497 ntBASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 CNN2P6-201ENST00000439038 900 ntBASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCHD4Q6ZW05 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms