Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.77■□□□□ 0.76
PACS1Q6VY07 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS1Q6VY07 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
PACS1Q6VY07 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.77■□□□□ 0.76
PACS1Q6VY07 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
PACS1Q6VY07 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS1Q6VY07 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PACS1Q6VY07 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS1Q6VY07 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
PACS1Q6VY07 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS1Q6VY07 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.77■□□□□ 0.76
PACS1Q6VY07 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS1Q6VY07 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS1Q6VY07 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PACS1Q6VY07 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS1Q6VY07 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PACS1Q6VY07 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PACS1Q6VY07 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.76■□□□□ 0.75
PACS1Q6VY07 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
PACS1Q6VY07 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.76■□□□□ 0.75
PACS1Q6VY07 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PACS1Q6VY07 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PACS1Q6VY07 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PACS1Q6VY07 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.76■□□□□ 0.75
PACS1Q6VY07 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PACS1Q6VY07 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PACS1Q6VY07 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.76■□□□□ 0.75
PACS1Q6VY07 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.76■□□□□ 0.75
PACS1Q6VY07 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.76■□□□□ 0.75
PACS1Q6VY07 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.76■□□□□ 0.75
PACS1Q6VY07 AC060766.5-201ENST00000590539 871 ntBASIC19.76■□□□□ 0.75
PACS1Q6VY07 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.76■□□□□ 0.75
PACS1Q6VY07 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.76■□□□□ 0.75
PACS1Q6VY07 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS1Q6VY07 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
PACS1Q6VY07 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.75■□□□□ 0.75
PACS1Q6VY07 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PACS1Q6VY07 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.75■□□□□ 0.75
PACS1Q6VY07 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.75■□□□□ 0.75
PACS1Q6VY07 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.75■□□□□ 0.75
PACS1Q6VY07 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.75■□□□□ 0.75
PACS1Q6VY07 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.75■□□□□ 0.75
PACS1Q6VY07 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.75■□□□□ 0.75
PACS1Q6VY07 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PACS1Q6VY07 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
PACS1Q6VY07 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS1Q6VY07 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS1Q6VY07 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.74■□□□□ 0.75
PACS1Q6VY07 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.74■□□□□ 0.75
PACS1Q6VY07 AL032819.2-201ENST00000624543 2162 ntBASIC19.74■□□□□ 0.75
PACS1Q6VY07 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS1Q6VY07 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS1Q6VY07 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
PACS1Q6VY07 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS1Q6VY07 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS1Q6VY07 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS1Q6VY07 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS1Q6VY07 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.74■□□□□ 0.75
PACS1Q6VY07 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS1Q6VY07 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PACS1Q6VY07 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PACS1Q6VY07 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.74■□□□□ 0.75
PACS1Q6VY07 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.74■□□□□ 0.75
PACS1Q6VY07 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PACS1Q6VY07 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms