Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 UNC93B5-201ENST00000530315 699 ntBASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.41
NHLRC1Q6VVB1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NHLRC1Q6VVB1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NHLRC1Q6VVB1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
NHLRC1Q6VVB1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NHLRC1Q6VVB1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.58■□□□□ 0.41
NHLRC1Q6VVB1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.58■□□□□ 0.41
NHLRC1Q6VVB1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
NHLRC1Q6VVB1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 UNC93B4-201ENST00000505679 747 ntBASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 AC008403.3-201ENST00000598924 454 ntBASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NHLRC1Q6VVB1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NHLRC1Q6VVB1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 SOX15-203ENST00000570788 1093 ntBASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms