Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.02■□□□□ 0.32
C11orf88Q6PI97 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
C11orf88Q6PI97 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.02■□□□□ 0.32
C11orf88Q6PI97 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
C11orf88Q6PI97 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.02■□□□□ 0.32
C11orf88Q6PI97 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.02■□□□□ 0.32
C11orf88Q6PI97 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.02■□□□□ 0.32
C11orf88Q6PI97 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.02■□□□□ 0.32
C11orf88Q6PI97 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
C11orf88Q6PI97 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
C11orf88Q6PI97 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.02■□□□□ 0.31
C11orf88Q6PI97 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
C11orf88Q6PI97 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
C11orf88Q6PI97 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
C11orf88Q6PI97 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
C11orf88Q6PI97 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 AC026185.1-201ENST00000445748 174 ntBASIC17.01■□□□□ 0.31
C11orf88Q6PI97 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.01■□□□□ 0.31
C11orf88Q6PI97 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
C11orf88Q6PI97 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C11orf88Q6PI97 KRT87P-202ENST00000534226 1464 ntBASIC17■□□□□ 0.31
C11orf88Q6PI97 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C11orf88Q6PI97 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C11orf88Q6PI97 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17■□□□□ 0.31
C11orf88Q6PI97 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
C11orf88Q6PI97 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17■□□□□ 0.31
C11orf88Q6PI97 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C11orf88Q6PI97 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C11orf88Q6PI97 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17■□□□□ 0.31
C11orf88Q6PI97 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17■□□□□ 0.31
C11orf88Q6PI97 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C11orf88Q6PI97 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17■□□□□ 0.31
C11orf88Q6PI97 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17■□□□□ 0.31
C11orf88Q6PI97 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17■□□□□ 0.31
C11orf88Q6PI97 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17■□□□□ 0.31
C11orf88Q6PI97 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17■□□□□ 0.31
C11orf88Q6PI97 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17■□□□□ 0.31
C11orf88Q6PI97 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17■□□□□ 0.31
C11orf88Q6PI97 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17■□□□□ 0.31
C11orf88Q6PI97 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
C11orf88Q6PI97 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C11orf88Q6PI97 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C11orf88Q6PI97 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C11orf88Q6PI97 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17■□□□□ 0.31
C11orf88Q6PI97 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C11orf88Q6PI97 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms