Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 NEK4P2-201ENST00000580004 1012 ntBASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 SPDYE15P-201ENST00000424157 909 ntBASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 SPDYE13P-201ENST00000445314 798 ntBASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
PTCRAQ6ISU1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 AL645929.1-201ENST00000420084 975 ntBASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 AC121338.2-201ENST00000622535 1744 ntBASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTCRAQ6ISU1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTCRAQ6ISU1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTCRAQ6ISU1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.23■□□□□ 0.83
PTCRAQ6ISU1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTCRAQ6ISU1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTCRAQ6ISU1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
PTCRAQ6ISU1 TSSC2-201ENST00000450217 709 ntBASIC20.23■□□□□ 0.83
PTCRAQ6ISU1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.23■□□□□ 0.83
PTCRAQ6ISU1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.23■□□□□ 0.83
PTCRAQ6ISU1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 IFNL4P1-201ENST00000607083 540 ntBASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 AC242852.2-201ENST00000615738 1807 ntBASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.22■□□□□ 0.83
PTCRAQ6ISU1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms