Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LDLRAP1Q5SW96 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.49■□□□□ 0.71
LDLRAP1Q5SW96 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.49■□□□□ 0.71
LDLRAP1Q5SW96 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.49■□□□□ 0.71
LDLRAP1Q5SW96 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.49■□□□□ 0.71
LDLRAP1Q5SW96 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 KRASP1-201ENST00000407852 552 ntBASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 YBX1P10-201ENST00000444752 975 ntBASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 AC142381.4-202ENST00000563973 229 ntBASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LDLRAP1Q5SW96 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 AC110285.5-201ENST00000611501 352 ntBASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 AL359736.2-201ENST00000621992 437 ntBASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 FAM197Y4-202ENST00000622692 608 ntBASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 AC087289.5-201ENST00000586076 3175 ntBASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAP1Q5SW96 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 GCSHP5-201ENST00000443090 522 ntBASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 AC098590.1-201ENST00000468126 897 ntBASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 AC004264.1-201ENST00000608354 794 ntBASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
LDLRAP1Q5SW96 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms