Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC144BQ3MJ40 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.75■■□□□ 1.23
CCDC144BQ3MJ40 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.75■■□□□ 1.23
CCDC144BQ3MJ40 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.75■■□□□ 1.23
CCDC144BQ3MJ40 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.75■■□□□ 1.23
CCDC144BQ3MJ40 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.75■■□□□ 1.23
CCDC144BQ3MJ40 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.75■■□□□ 1.23
CCDC144BQ3MJ40 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC144BQ3MJ40 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 MIR2861-201ENST00000636310 90 ntBASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC144BQ3MJ40 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 TCF3P1-201ENST00000423021 1937 ntBASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 AC098818.2-201ENST00000564925 2320 ntBASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 KRT16P5-201ENST00000455284 522 ntBASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 AF186192.3-201ENST00000583427 947 ntBASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 AC012306.2-201ENST00000609350 630 ntBASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 AC026471.5-201ENST00000615068 467 ntBASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 AC097493.4-201ENST00000641197 219 ntBASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 AC125437.2-201ENST00000625180 2167 ntBASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.73■■□□□ 1.23
CCDC144BQ3MJ40 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 AP003071.4-201ENST00000562276 1284 ntBASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 HTR7P1-201ENST00000538670 1336 ntBASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 NBPF21P-201ENST00000425093 1451 ntBASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC144BQ3MJ40 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC144BQ3MJ40 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms