Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCL20P78556 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
CCL20P78556 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCL20P78556 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CCL20P78556 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCL20P78556 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.42■□□□□ 0.06
CCL20P78556 FP475955.4-201ENST00000623131 1990 ntBASIC15.42■□□□□ 0.06
CCL20P78556 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCL20P78556 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.42■□□□□ 0.06
CCL20P78556 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCL20P78556 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCL20P78556 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CCL20P78556 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
CCL20P78556 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCL20P78556 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
CCL20P78556 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCL20P78556 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCL20P78556 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.42■□□□□ 0.06
CCL20P78556 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.42■□□□□ 0.06
CCL20P78556 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.42■□□□□ 0.06
CCL20P78556 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CCL20P78556 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCL20P78556 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.42■□□□□ 0.06
CCL20P78556 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCL20P78556 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
CCL20P78556 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CCL20P78556 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CCL20P78556 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CCL20P78556 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 POU5F1P4-201ENST00000413175 1085 ntBASIC15.41■□□□□ 0.06
CCL20P78556 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.41■□□□□ 0.06
CCL20P78556 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.41■□□□□ 0.06
CCL20P78556 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.41■□□□□ 0.06
CCL20P78556 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.41■□□□□ 0.06
CCL20P78556 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CCL20P78556 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CCL20P78556 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL20P78556 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL20P78556 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CCL20P78556 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL20P78556 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL20P78556 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCL20P78556 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CCL20P78556 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCL20P78556 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.4■□□□□ 0.06
CCL20P78556 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCL20P78556 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.4■□□□□ 0.06
CCL20P78556 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CCL20P78556 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL20P78556 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CCL20P78556 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.4■□□□□ 0.06
CCL20P78556 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.4■□□□□ 0.06
CCL20P78556 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL20P78556 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CCL20P78556 AC008175.2-201ENST00000612840 297 ntBASIC15.4■□□□□ 0.06
CCL20P78556 AC012354.3-201ENST00000623734 483 ntBASIC15.4■□□□□ 0.06
CCL20P78556 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.4■□□□□ 0.06
CCL20P78556 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CCL20P78556 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
CCL20P78556 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
CCL20P78556 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCL20P78556 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCL20P78556 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL20P78556 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCL20P78556 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL20P78556 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.4■□□□□ 0.06
CCL20P78556 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CCL20P78556 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCL20P78556 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.39■□□□□ 0.05
CCL20P78556 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCL20P78556 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL20P78556 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL20P78556 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL20P78556 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL20P78556 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CCL20P78556 Z98044.1-201ENST00000632503 1764 ntBASIC15.39■□□□□ 0.05
CCL20P78556 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCL20P78556 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.39■□□□□ 0.05
CCL20P78556 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.39■□□□□ 0.05
CCL20P78556 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.39■□□□□ 0.05
CCL20P78556 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCL20P78556 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL20P78556 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL20P78556 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL20P78556 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms