Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
UBE2NP61088 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2NP61088 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2NP61088 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2NP61088 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2NP61088 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2NP61088 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.22■□□□□ 0.35
UBE2NP61088 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
UBE2NP61088 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.22■□□□□ 0.35
UBE2NP61088 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.22■□□□□ 0.35
UBE2NP61088 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
UBE2NP61088 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.22■□□□□ 0.35
UBE2NP61088 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.22■□□□□ 0.35
UBE2NP61088 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.22■□□□□ 0.35
UBE2NP61088 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2NP61088 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
UBE2NP61088 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.22■□□□□ 0.35
UBE2NP61088 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2NP61088 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
UBE2NP61088 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2NP61088 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UBE2NP61088 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2NP61088 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.22■□□□□ 0.35
UBE2NP61088 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2NP61088 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UBE2NP61088 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2NP61088 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2NP61088 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.22■□□□□ 0.35
UBE2NP61088 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2NP61088 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2NP61088 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2NP61088 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.21■□□□□ 0.35
UBE2NP61088 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.21■□□□□ 0.35
UBE2NP61088 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UBE2NP61088 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
UBE2NP61088 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.21■□□□□ 0.35
UBE2NP61088 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
UBE2NP61088 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.21■□□□□ 0.35
UBE2NP61088 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
UBE2NP61088 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.21■□□□□ 0.35
UBE2NP61088 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.21■□□□□ 0.35
UBE2NP61088 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.21■□□□□ 0.35
UBE2NP61088 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.21■□□□□ 0.35
UBE2NP61088 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.21■□□□□ 0.35
UBE2NP61088 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.21■□□□□ 0.35
UBE2NP61088 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2NP61088 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.21■□□□□ 0.34
UBE2NP61088 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
UBE2NP61088 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.21■□□□□ 0.34
UBE2NP61088 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.2■□□□□ 0.34
UBE2NP61088 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.2■□□□□ 0.34
UBE2NP61088 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.2■□□□□ 0.34
UBE2NP61088 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
UBE2NP61088 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.2■□□□□ 0.34
UBE2NP61088 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.2■□□□□ 0.34
UBE2NP61088 YBX1P10-201ENST00000444752 975 ntBASIC17.2■□□□□ 0.34
UBE2NP61088 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.2■□□□□ 0.34
UBE2NP61088 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.2■□□□□ 0.34
UBE2NP61088 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.2■□□□□ 0.34
UBE2NP61088 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
UBE2NP61088 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.2■□□□□ 0.34
UBE2NP61088 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2NP61088 AC073130.3-201ENST00000624389 2278 ntBASIC17.19■□□□□ 0.34
UBE2NP61088 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2NP61088 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms