Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.64■□□□□ 0.57
SH3BGRP55822 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.64■□□□□ 0.57
SH3BGRP55822 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.64■□□□□ 0.57
SH3BGRP55822 NTF6G-201ENST00000591094 616 ntBASIC18.64■□□□□ 0.57
SH3BGRP55822 AC053503.5-201ENST00000601508 636 ntBASIC18.64■□□□□ 0.57
SH3BGRP55822 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3BGRP55822 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3BGRP55822 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3BGRP55822 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3BGRP55822 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SH3BGRP55822 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SH3BGRP55822 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.64■□□□□ 0.57
SH3BGRP55822 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.64■□□□□ 0.57
SH3BGRP55822 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SH3BGRP55822 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3BGRP55822 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SH3BGRP55822 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.64■□□□□ 0.57
SH3BGRP55822 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SH3BGRP55822 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SH3BGRP55822 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SH3BGRP55822 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SH3BGRP55822 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.63■□□□□ 0.57
SH3BGRP55822 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 AL162430.1-201ENST00000480705 870 ntBASIC18.63■□□□□ 0.57
SH3BGRP55822 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.63■□□□□ 0.57
SH3BGRP55822 EEF1DP3-203ENST00000566025 782 ntBASIC18.63■□□□□ 0.57
SH3BGRP55822 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SH3BGRP55822 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.63■□□□□ 0.57
SH3BGRP55822 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.63■□□□□ 0.57
SH3BGRP55822 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SH3BGRP55822 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3BGRP55822 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.62■□□□□ 0.57
SH3BGRP55822 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.62■□□□□ 0.57
SH3BGRP55822 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.62■□□□□ 0.57
SH3BGRP55822 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
SH3BGRP55822 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.62■□□□□ 0.57
SH3BGRP55822 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 AP004607.4-201ENST00000530158 1459 ntBASIC18.62■□□□□ 0.57
SH3BGRP55822 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
SH3BGRP55822 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SH3BGRP55822 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.62■□□□□ 0.57
SH3BGRP55822 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.62■□□□□ 0.57
SH3BGRP55822 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SH3BGRP55822 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.62■□□□□ 0.57
SH3BGRP55822 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3BGRP55822 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3BGRP55822 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3BGRP55822 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3BGRP55822 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.61■□□□□ 0.57
SH3BGRP55822 NOC2LP2-201ENST00000407594 1944 ntBASIC18.61■□□□□ 0.57
SH3BGRP55822 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.61■□□□□ 0.57
SH3BGRP55822 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3BGRP55822 AC004854.2-201ENST00000608450 1441 ntBASIC18.61■□□□□ 0.57
SH3BGRP55822 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3BGRP55822 KRT18P5-201ENST00000436075 1291 ntBASIC18.61■□□□□ 0.57
SH3BGRP55822 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.61■□□□□ 0.57
SH3BGRP55822 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.61■□□□□ 0.57
SH3BGRP55822 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.61■□□□□ 0.57
SH3BGRP55822 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SH3BGRP55822 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SH3BGRP55822 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.61■□□□□ 0.57
SH3BGRP55822 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SH3BGRP55822 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3BGRP55822 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SH3BGRP55822 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3BGRP55822 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SH3BGRP55822 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3BGRP55822 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3BGRP55822 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3BGRP55822 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms