Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PDX1P52945 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.03■□□□□ 0.64
PDX1P52945 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.03■□□□□ 0.64
PDX1P52945 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.03■□□□□ 0.64
PDX1P52945 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDX1P52945 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDX1P52945 LINC01568-207ENST00000641790 1380 ntBASIC19.03■□□□□ 0.64
PDX1P52945 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PDX1P52945 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDX1P52945 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PDX1P52945 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.02■□□□□ 0.64
PDX1P52945 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.02■□□□□ 0.64
PDX1P52945 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDX1P52945 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.02■□□□□ 0.64
PDX1P52945 AC020907.5-201ENST00000624372 1936 ntBASIC19.02■□□□□ 0.64
PDX1P52945 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDX1P52945 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDX1P52945 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDX1P52945 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
PDX1P52945 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDX1P52945 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDX1P52945 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDX1P52945 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.02■□□□□ 0.64
PDX1P52945 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.02■□□□□ 0.64
PDX1P52945 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.02■□□□□ 0.64
PDX1P52945 KRT18P57-201ENST00000443599 1254 ntBASIC19.02■□□□□ 0.64
PDX1P52945 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.02■□□□□ 0.64
PDX1P52945 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.02■□□□□ 0.64
PDX1P52945 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDX1P52945 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.02■□□□□ 0.64
PDX1P52945 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.02■□□□□ 0.64
PDX1P52945 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.02■□□□□ 0.64
PDX1P52945 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.02■□□□□ 0.64
PDX1P52945 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDX1P52945 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.02■□□□□ 0.64
PDX1P52945 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.02■□□□□ 0.64
PDX1P52945 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
PDX1P52945 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDX1P52945 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
PDX1P52945 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDX1P52945 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDX1P52945 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.01■□□□□ 0.63
PDX1P52945 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PDX1P52945 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDX1P52945 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDX1P52945 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDX1P52945 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PDX1P52945 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDX1P52945 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.01■□□□□ 0.63
PDX1P52945 TERF1P1-201ENST00000311003 1181 ntBASIC19.01■□□□□ 0.63
PDX1P52945 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDX1P52945 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.01■□□□□ 0.63
PDX1P52945 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.01■□□□□ 0.63
PDX1P52945 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.01■□□□□ 0.63
PDX1P52945 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.01■□□□□ 0.63
PDX1P52945 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.01■□□□□ 0.63
PDX1P52945 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDX1P52945 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDX1P52945 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.01■□□□□ 0.63
PDX1P52945 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.01■□□□□ 0.63
PDX1P52945 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDX1P52945 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.01■□□□□ 0.63
PDX1P52945 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.01■□□□□ 0.63
PDX1P52945 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDX1P52945 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDX1P52945 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.01■□□□□ 0.63
PDX1P52945 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDX1P52945 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.01■□□□□ 0.63
PDX1P52945 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDX1P52945 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19■□□□□ 0.63
PDX1P52945 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
PDX1P52945 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19■□□□□ 0.63
PDX1P52945 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDX1P52945 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDX1P52945 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19■□□□□ 0.63
PDX1P52945 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19■□□□□ 0.63
PDX1P52945 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19■□□□□ 0.63
PDX1P52945 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PDX1P52945 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19■□□□□ 0.63
PDX1P52945 NAPSB-206ENST00000562112 1266 ntBASIC19■□□□□ 0.63
PDX1P52945 AL049597.2-201ENST00000565575 961 ntBASIC19■□□□□ 0.63
PDX1P52945 C1QL1P1-201ENST00000568105 661 ntBASIC19■□□□□ 0.63
PDX1P52945 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19■□□□□ 0.63
PDX1P52945 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19■□□□□ 0.63
PDX1P52945 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19■□□□□ 0.63
PDX1P52945 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19■□□□□ 0.63
PDX1P52945 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDX1P52945 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19■□□□□ 0.63
PDX1P52945 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19■□□□□ 0.63
PDX1P52945 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDX1P52945 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PDX1P52945 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDX1P52945 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19■□□□□ 0.63
PDX1P52945 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDX1P52945 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDX1P52945 KRT8P17-201ENST00000453110 1448 ntBASIC19■□□□□ 0.63
PDX1P52945 AC073508.3-201ENST00000619697 1419 ntBASIC19■□□□□ 0.63
PDX1P52945 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDX1P52945 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDX1P52945 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms