Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB28P51157 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB28P51157 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB28P51157 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RAB28P51157 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB28P51157 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB28P51157 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RAB28P51157 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB28P51157 AL353807.1-201ENST00000427475 662 ntBASIC18.94■□□□□ 0.62
RAB28P51157 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.94■□□□□ 0.62
RAB28P51157 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB28P51157 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.94■□□□□ 0.62
RAB28P51157 C1QL1P1-201ENST00000568105 661 ntBASIC18.94■□□□□ 0.62
RAB28P51157 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.94■□□□□ 0.62
RAB28P51157 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB28P51157 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB28P51157 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB28P51157 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB28P51157 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB28P51157 HTR7P1-201ENST00000538670 1336 ntBASIC18.94■□□□□ 0.62
RAB28P51157 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RAB28P51157 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB28P51157 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
RAB28P51157 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RAB28P51157 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
RAB28P51157 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RAB28P51157 KRT8P8-201ENST00000434750 1448 ntBASIC18.93■□□□□ 0.62
RAB28P51157 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB28P51157 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.93■□□□□ 0.62
RAB28P51157 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RAB28P51157 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB28P51157 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.93■□□□□ 0.62
RAB28P51157 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 AC008550.1-201ENST00000511500 884 ntBASIC18.93■□□□□ 0.62
RAB28P51157 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB28P51157 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB28P51157 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.93■□□□□ 0.62
RAB28P51157 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB28P51157 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB28P51157 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.93■□□□□ 0.62
RAB28P51157 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB28P51157 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.93■□□□□ 0.62
RAB28P51157 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB28P51157 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB28P51157 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB28P51157 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
RAB28P51157 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.92■□□□□ 0.62
RAB28P51157 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB28P51157 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB28P51157 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB28P51157 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB28P51157 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RAB28P51157 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.92■□□□□ 0.62
RAB28P51157 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB28P51157 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.92■□□□□ 0.62
RAB28P51157 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB28P51157 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB28P51157 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
RAB28P51157 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RAB28P51157 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB28P51157 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB28P51157 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB28P51157 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB28P51157 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB28P51157 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.92■□□□□ 0.62
RAB28P51157 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB28P51157 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB28P51157 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB28P51157 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB28P51157 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB28P51157 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB28P51157 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB28P51157 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RAB28P51157 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB28P51157 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB28P51157 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.91■□□□□ 0.62
RAB28P51157 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.91■□□□□ 0.62
RAB28P51157 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB28P51157 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB28P51157 MIR718-201ENST00000390190 70 ntBASIC18.91■□□□□ 0.62
RAB28P51157 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB28P51157 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB28P51157 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms